RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SRP14P37108 136 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 CLDN8P56748 225 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 KLF3P57682 345 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 RPS27AP62979 156 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 UBA52P62987 128 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TNFRSF17Q02223 184 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PIGHQ14442 188 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 HEPACAMQ14CZ8 416 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 MEP1AQ16819 746 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 SPIN4Q56A73 249 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PCID2Q5JVF3 399 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 C1orf220Q5T0J3 134 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PRAMEF20Q5VT98 475 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 C9orf135Q5VTT2 229 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 LEMD1Q68G75 181 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 GLYATQ6IB77 296 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 EIF5AL1Q6IS14 154 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 LAIR2Q6ISS4 152 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 BTNL3Q6UXE8 466 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TMIGD1Q6UXZ0 262 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TTLL10Q6ZVT0 673 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ABHD13Q7L211 337 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF367Q7RTV3 350 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PXKQ7Z7A4 578 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TSPAN33Q86UF1 283 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PUSL1Q8N0Z8 303 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 OR5D18Q8NGL1 313 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 OR10A6Q8NH74 314 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TERB2Q8NHR7 220 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 C16orf52Q8NHV5 167 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TRMT10AQ8TBZ6 339 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TMEM163Q8TC26 289 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ACOT12Q8WYK0 555 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 NT5C3BQ969T7 300 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 UPRTQ96BW1 309 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 COQ8BQ96D53 544 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 SCRN2Q96FV2 425 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TPD52L3Q96J77 140 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 MCCC1Q96RQ3 725 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PRR25Q96S07 402 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PITX2Q99697 317 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 MGME1Q9BQP7 344 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 RIOK2Q9BVS4 552 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 OR10A4Q9H209 315 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 MMP28Q9H239 520 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ABCB9Q9NP78 766 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 SIX2Q9NPC8 291 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM118AQ9NWS6 357 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 GAR1Q9NY12 217 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 RASL12Q9NYN1 266 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 TRPC4Q9UBN4 977 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PEF1Q9UBV8 284 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF629Q9UEG4 869 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 KLF13Q9Y2Y9 288 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 RAP2CQ9Y3L5 183 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 CMAHPQ9Y471 501 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 CDH10Q9Y6N8 788 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 V9GYS6 101 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 IGHV4-30-2A0A087WSY4 118 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 A0A087WUJ7 227 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM240BA0A1B0GVZ2 78 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 TMEM72A0PK05 275 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 OR6C68A6NDL8 312 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PRORSD1PA6NEY8 169 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 DUXAA6NLW8 204 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 COLCA2A8K830 154 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 E9PQ18 207 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 GFYI3L273 518 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 CLIC1O00299 241 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PDXKO00764 312 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 BHLHE40O14503 412 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 CCSO14618 274 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 KHDRBS3O75525 346 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 GRAP2O75791 330 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 CFDP00746 253 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 IFNB1P01574 187 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 CD2P06729 351 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 GIPP09681 153 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 NR2F6P10588 404 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 IL7RP16871 459 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 KDELR1P24390 212 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 HTR2AP28223 471 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PRDX3P30048 256 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SDC4P31431 198 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 GRK5P34947 590 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 TAGLN2P37802 199 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 GPR4P46093 362 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 RGRP47804 291 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 KCNJ1P48048 391 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 MARCKSL1P49006 195 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 EVX1P49640 407 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 CEBPDP49716 269 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 SELENOTP62341 195 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PPP3R1P63098 170 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PSG6Q00889 435 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 DEFA5Q01523 94 aa4.81□□□□□ -1.64
ECHDC1-206ENST00000417628 PLP2Q04941 152 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms