RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 OR1F1O43749 312 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TIMM8AO60220 97 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAD51DO75771 328 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC22A5O76082 557 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAB3DO95716 219 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DHFRP00374 187 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 IFNA6P05013 189 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SERPINE2P07093 398 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 FABP1P07148 127 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ERCC1P07992 297 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAB40ALP0C0E4 278 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR56A5P0C7T3 313 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DUX4L2P0CJ85 424 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DUX4L3P0CJ86 424 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DUX4L4P0CJ87 422 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DUX4L5P0CJ88 424 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DUX4L6P0CJ89 424 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DUX4L7P0CJ90 424 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 PSKH1P11801 424 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ATF6P18850 670 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRKACGP22612 351 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 LMO2P25791 158 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DPP4P27487 766 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 PTGER4P35408 488 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 CRYBB2P43320 205 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF140P52738 457 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 NKX2-5P52952 324 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 MTCP1P56278 107 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 RGS8P57771 180 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 RPS14P62263 151 aaKnown RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SELENOWP63302 87 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SP3Q02447 781 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 PJVKQ0ZLH3 352 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TPBGQ13641 420 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 P2RY14Q15391 338 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF79Q15937 498 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 CARTPTQ16568 116 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 NDUFA9Q16795 377 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TATDN3Q17R31 274 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 RFTN2Q52LD8 501 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 CARD16Q5EG05 197 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 NXNL2Q5VZ03 156 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 LYSMD4Q5XG99 296 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SAXO2Q658L1 398 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 CD200R1LQ6Q8B3 271 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TEX261Q6UWH6 196 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ENPP7Q6UWV6 458 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 GCNT7Q6ZNI0 430 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 IL17RELQ6ZVW7 336 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SMIM5Q71RC9 77 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 GOLGA7Q7Z5G4 137 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SCD5Q86SK9 330 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TAC4Q86UU9 113 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 AMIGO1Q86WK6 493 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SNX29P2Q8IUI4 249 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 APOBEC3FQ8IUX4 373 aaKnown RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 CCDC71Q8IV32 467 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 MSRB3Q8IXL7 192 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TMEM123Q8N131 208 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 LYG1Q8N1E2 194 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 CADM2Q8N3J6 435 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF843Q8N446 348 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 RYBPQ8N488 228 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SPEM1Q8N4L4 309 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 EIF4E3Q8N5X7 224 aaKnown RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 LRRC17Q8N6Y2 441 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 YIPF7Q8N8F6 280 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 Q8N9G6 341 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 GATSQ8NAP1 163 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SIDT2Q8NBJ9 832 aaKnown RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TMEM178AQ8NBL3 297 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 C19orf18Q8NEA5 215 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR4C15Q8NGM1 316 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR5M8Q8NGP6 311 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR2AJ1Q8NGZ0 328 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DTD1Q8TEA8 209 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ASB13Q8WXK3 278 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 LHX4Q969G2 390 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 MYLPFQ96A32 169 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 PYCR2Q96C36 320 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 CMTM7Q96FZ5 175 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 MS4A10Q96PG2 267 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 MED10Q9BTT4 135 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ST6GALNAC5Q9BVH7 336 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRRG4Q9BZD6 226 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TM6SF2Q9BZW4 377 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZYG11BQ9C0D3 744 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TOLLIPQ9H0E2 274 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR51E2Q9H255 320 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR51B5Q9H339 312 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DPAGT1Q9H3H5 408 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TMEM38AQ9H6F2 299 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 METTL8Q9H825 291 aaKnown RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TRIM45Q9H8W5 580 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 MTHFD2LQ9H903 347 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 TBC1D17Q9HA65 648 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ELOVL3Q9HB03 270 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 LRTM1Q9HBL6 345 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC25A19Q9HC21 320 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 A4GALTQ9NPC4 353 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms