RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ANXA3P12429 323 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 PSMB1P20618 241 aaKnown RBP11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 C4BPBP20851 252 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 GIFP27352 417 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 GUCA1AP43080 201 aaPredicted RBP11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 NKX2-5P52952 324 aaPredicted RBP11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 CLRN1P58418 232 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 TAS2R20P59543 309 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 POU3F1Q03052 451 aaPredicted RBP11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 DBPQ10586 325 aaPredicted RBP11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 MELKQ14680 651 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 FAM189A2Q15884 450 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF468Q5VIY5 522 aaPredicted RBP11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 ANKRD16Q6P6B7 361 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 LYPD8Q6UX82 237 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 SYT9Q86SS6 491 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 SLC26A10Q8NG04 563 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 OR2M3Q8NG83 312 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 OR6M1Q8NGM8 313 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 OR2AJ1Q8NGZ0 328 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 PTX4Q96A99 478 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 SLC25A38Q96DW6 304 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 GFI1Q99684 422 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 NAA11Q9BSU3 229 aaPredicted RBP11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 SLCO5A1Q9H2Y9 848 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 C1orf198Q9H425 327 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 NUDT15Q9NV35 164 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 HPF1Q9NWY4 346 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 SH3BGRL2Q9UJC5 107 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 VDAC3Q9Y277 283 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 LRP12Q9Y561 859 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 CSMD2Q7Z408 3487 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 A0A0A6YYJ9 748 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 A0A1B0GVC2 190 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 OR5H15A6NDH6 313 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 A6NIN4 97 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF726A6NNF4 738 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 CCL21O00585 134 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 EIF1BO60739 113 aaKnown RBP11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 PEX14O75381 377 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 VAMP5O95183 116 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 TGM6O95932 706 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 ERCC1P07992 297 aaPredicted RBP11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 LAP3P28838 519 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 SRP9P49458 86 aaKnown RBP11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 MMP16P51512 607 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 KRTAP10-9P60411 292 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF169Q14929 603 aaPredicted RBP11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 BCL2L15Q5TBC7 163 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 TMEM225Q6GV28 225 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 SPINK14Q6IE38 97 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 OR5M10Q6IEU7 315 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 SPNS3Q6ZMD2 512 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 FADS6Q8N9I5 356 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 OR13C3Q8NGS6 347 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 OR6X1Q8NH79 312 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 HSD17B8Q92506 261 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 RELTQ969Z4 430 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 DACT3Q96B18 629 aaPredicted RBP11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 SLC25A44Q96H78 314 aaPredicted RBP11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 KLHDC3Q9BQ90 382 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 TMEM246Q9BRR3 403 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 GHITMQ9H3K2 345 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 HRASLSQ9HDD0 168 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 PAQR5Q9NXK6 330 aaPredicted RBP11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 LRFN1Q9P244 771 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 KLHL13Q9P2N7 655 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 OR52A1Q9UKL2 312 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 FBXL3Q9UKT7 428 aa11.42□□□□□ -0.58
SMARCB1-203ENST00000407082 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 TRAV6A0A075B6T7 132 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 A0A0B4J203 849 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 TMEM269A0A1B0GVZ9 245 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 GJE1A6NN92 205 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 A8MV72 311 aaPredicted RBP11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 IL5P05113 134 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 CD37P11049 281 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF43P17038 809 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ADRA2CP18825 462 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 CDK2P24941 298 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 SSTR2P30874 369 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 BTCP35070 178 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 PTGDSP41222 190 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 PTH2RP49190 550 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 TNFSF10P50591 281 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 AGFG1P52594 562 aaKnown RBP11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 BIDP55957 195 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ACTBP60709 375 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ACTG1P63261 375 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 MYBPHQ13203 477 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 TESK1Q15569 626 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 OR1C1Q15619 314 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 OR7E24Q6IFN5 339 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 RAB12Q6IQ22 244 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 TMEM53Q6P2H8 277 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ARSKQ6UWY0 536 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 GFRALQ6UXV0 394 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 DNM1P46Q6ZS02 220 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 CREB3L2Q70SY1 520 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 PRSS45Q7RTY3 260 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms