RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 C14orf79Q96F83 325 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 ZNF331Q9NQX6 463 aaPredicted RBP12.48□□□□□ -0.41
VAPA-202ENST00000400000 TIMM9Q9Y5J7 89 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 ANGPTL7O43827 346 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 IL9P15248 144 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 Q56UQ5 140 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 OR2AK2Q8NG84 335 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
VAPA-202ENST00000400000 SBK2P0C263 348 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 RGS7BPQ6MZT1 257 aaPredicted RBP12.48□□□□□ -0.41
VAPA-202ENST00000400000 SLC25A26Q70HW3 274 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 RTL10Q7L3V2 364 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 DOK3Q7L591 496 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 GALNT16Q8N428 558 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 FBXL6Q8N531 539 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 OR6M1Q8NGM8 313 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 NIPSNAP3BQ9BS92 247 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 IGHV3-43A0A0B4J1X8 118 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 FIGNL2A6NMB9 653 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 IGHV3-43DP0DP04 118 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 RPS19P39019 145 aaKnown RBP12.48□□□□□ -0.41
VAPA-202ENST00000400000 CD300LGQ6UXG3 332 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 OPALINQ96PE5 141 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 PHIPQ8WWQ0 1821 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 ATXN7O15265 892 aaPredicted RBP12.48□□□□□ -0.41
VAPA-202ENST00000400000 HLA-HP01893 362 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 DGCR2P98153 550 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 TMUB2Q71RG4 321 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 A4GNTQ9UNA3 340 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
VAPA-202ENST00000400000 FOXF1Q12946 379 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 SPNS3Q6ZMD2 512 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 GABRG1Q8N1C3 465 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 FAM109AQ8N4B1 249 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 L3MBTL4Q8NA19 623 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 OR52B4Q8NGK2 314 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 OR2AE1Q8NHA4 323 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 LPAR2Q9HBW0 351 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 SLC35D1Q9NTN3 355 aa12.48□□□□□ -0.41
VAPA-202ENST00000400000 FCGR2CP31995 323 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 OR1C1Q15619 314 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 ACSM6Q6P461 480 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 LGI3Q8N145 548 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 OLIG1Q8TAK6 271 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 ATF6BQ99941 703 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 CORINQ9Y5Q5 1042 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 ATG2BQ96BY7 2078 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 SELEP16581 610 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 HRH1P35367 487 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 NXF2Q9GZY0 626 aaKnown RBP12.47□□□□□ -0.41
VAPA-202ENST00000400000 MSL2Q9HCI7 577 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 SCN11AQ9UI33 1791 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 AKR1C3P42330 323 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 MTNR1BP49286 362 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 SKA3Q8IX90 412 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 ZDHHC23Q8IYP9 409 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 SULT1C4O75897 302 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 ARR3P36575 388 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 HYAL1Q12794 435 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 TCTN1Q2MV58 587 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 C1QTNF3Q9BXJ4 246 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 PXDC1Q5TGL8 231 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 LYPD8Q6UX82 237 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 PBOV1Q9GZY1 135 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 DCAF16Q9NXF7 216 aa12.47□□□□□ -0.41
VAPA-202ENST00000400000 ZNF230Q9UIE0 474 aaPredicted RBP12.47□□□□□ -0.41
VAPA-202ENST00000400000 C20orf202A1L168 122 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 GPRIN2O60269 458 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 GLB1P16278 677 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 FAHP16930 419 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 SPI1P17947 270 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 TMEM267Q0VDI3 215 aaPredicted RBP12.46□□□□□ -0.41
VAPA-202ENST00000400000 DRAM2Q6UX65 266 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 FBXL14Q8N1E6 418 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 BAHD1Q8TBE0 780 aaPredicted RBP12.46□□□□□ -0.41
VAPA-202ENST00000400000 ERGIC1Q969X5 290 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 LYRM4Q9HD34 91 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 DSCR3O14972 297 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 LYZL6O75951 148 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 HBE1P02100 147 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 FPR3P25089 353 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 ERHP84090 104 aaKnown RBP12.46□□□□□ -0.41
VAPA-202ENST00000400000 Q1RN00 199 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 SAXO2Q658L1 398 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 C3orf80F5H4A9 247 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 COX7A2P2O60397 106 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 LHFPL2Q6ZUX7 228 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 COMMD5Q9GZQ3 224 aa12.46□□□□□ -0.41
VAPA-202ENST00000400000 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.41
VAPA-202ENST00000400000 MPLP40238 635 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 SYT6Q5T7P8 510 aaPredicted RBP12.46□□□□□ -0.42
VAPA-202ENST00000400000 TGIF2LXQ8IUE1 241 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 LRRC61Q9BV99 259 aa12.46□□□□□ -0.42
VAPA-202ENST00000400000 DBX1A6NMT0 343 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms