RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 OPA3Q9H6K4 179 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 FGF21Q9NSA1 209 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 MRPS28Q9Y2Q9 187 aaKnown RBP13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 TP53I11O14683 189 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 AKR7A3O95154 331 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 MFGE8Q08431 387 aaPredicted RBP13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 GUK1Q16774 197 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 VN1R4Q7Z5H5 301 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 LILRB2Q8N423 598 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 CCDC71LQ8N9Z2 235 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 OR5L2Q8NGL0 311 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 MEGF10Q96KG7 1140 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 MRPL22Q9NWU5 206 aaKnown RBP13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 BHLHE40O14503 412 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 EIF3GO75821 320 aaKnown RBP eCLIP13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 ZNF93P35789 620 aaPredicted RBP13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 NPBWR1P48145 328 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 Q6ZS52 159 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 CA13Q8N1Q1 262 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 SLC22A24Q8N4F4 322 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 TMEM217Q8N7C4 229 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 OR2G3Q8NGZ4 309 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 C16orf52Q8NHV5 167 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 SGK3Q96BR1 496 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 ZNF576Q9H609 170 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 KCNG2Q9UJ96 466 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 MMP17Q9ULZ9 603 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 SLC7A11Q9UPY5 501 aa13.2□□□□□ -0.3
RPRD1A-202ENST00000399022 GREB1Q4ZG55 1949 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 LINC00587B1AMM8 73 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 GATCO43716 136 aaKnown RBP13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 EMDP50402 254 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 GFERP55789 205 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 RAB11AP62491 216 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 EEF1A2Q05639 463 aaKnown RBP13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 OR2A2Q6IF42 318 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 CPEB2Q7Z5Q1 589 aaKnown RBP13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 SUMF1Q8NBK3 374 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 RRNAD1Q96FB5 475 aaKnown RBP13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 SPACA5Q96QH8 159 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 HIST1H2AAQ96QV6 131 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 SEC11CQ9BY50 192 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 DSPPQ9NZW4 1301 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 OTOFQ9HC10 1997 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 NPIPA2E9PIF3 369 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 NPIPA3F8WFD2 350 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 SEMA7AO75326 666 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 QDPRP09417 244 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 VSIG10L2P0DP72 767 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 ZNF43P17038 809 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 COL9A1P20849 921 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 ZNF136P52737 540 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 OR1D5P58170 312 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 POLR2GP62487 172 aaKnown RBP eCLIP13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 MIDNQ504T8 468 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 C1orf87Q8N0U7 546 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 TMEM229BQ8NBD8 167 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 OR56B1Q8NGI3 324 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 LCORQ96JN0 433 aaPredicted RBP13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 WFDC6Q9BQY6 131 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 SLC17A2O00624 439 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 EML2O95834 649 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 VWA2Q5GFL6 755 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 MRM1Q6IN84 353 aaKnown RBP13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 LFNGQ8NES3 379 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 KCNG3Q8TAE7 436 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 HS3ST3A1Q9Y663 406 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 NPIPB8E9PQR5 432 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 F5H5K5 113 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 LILRB5O75023 590 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 CTAG2O75638 210 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 RECKO95980 971 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 CRYBA2P53672 197 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 PPP1CAP62136 330 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 ANKRD16Q6P6B7 361 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 KIRREL2Q6UWL6 708 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 TLNRD1Q9H1K6 362 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 KCNK15Q9H427 330 aa13.19□□□□□ -0.3
RPRD1A-202ENST00000399022 HPP00738 406 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 TBXA2RP21731 343 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 LIMS1P48059 325 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 HNF4GQ14541 408 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 AWAT1Q58HT5 328 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 C1orf53Q5VUE5 145 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 TFAP2EQ6VUC0 442 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 ARIH2OSQ8N7S6 290 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 YBX2Q9Y2T7 364 aaKnown RBP13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 SCN2AQ99250 2005 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 A0A087X0M5 115 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 A0A1B0GX30 115 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 ADRA2AP08913 450 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 H2AFB1P0C5Y9 115 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 TMIGD3P0DMS9 266 aaPredicted RBP13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 GNB3P16520 340 aa13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 SRSF5Q13243 272 aaKnown RBP13.18□□□□□ -0.3
RPRD1A-202ENST00000399022 SLC43A2Q8N370 569 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms