RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 FOXF1Q12946 379 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 C9orf135Q5VTT2 229 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 Q6ZNX1 250 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 SLC36A1Q7Z2H8 476 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 FBXL14Q8N1E6 418 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 SIRT6Q8N6T7 355 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 OR5D13Q8NGL4 314 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 ZNF107Q9UII5 783 aaPredicted RBP14.14□□□□□ -0.15
GNE-202ENST00000396594 FBXL4Q9UKA2 621 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 EXOGQ9Y2C4 368 aaKnown RBP14.14□□□□□ -0.15
GNE-202ENST00000396594 CITO14578 2027 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 MT-ND4LP03901 98 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 S100A8P05109 93 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 ANXA7P20073 488 aaKnown RBP14.13□□□□□ -0.15
GNE-202ENST00000396594 GNG3P63215 75 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 STEAP3Q658P3 488 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 ZNF425Q6IV72 752 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 Q6ZPB1 254 aaPredicted RBP14.13□□□□□ -0.15
GNE-202ENST00000396594 OSR2Q8N2R0 312 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 ZDHHC22Q8N966 263 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 OPN1LWP04000 364 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 PRAMEF5Q5TYX0 476 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 PRAMEF6Q5VXH4 476 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 OR10R2Q8NGX6 335 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 OR51E1Q8TCB6 317 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 PAQR8Q8TEZ7 354 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 YIPF6Q96EC8 236 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 NIPSNAP3BQ9BS92 247 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 GPR84Q9NQS5 396 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 OR5B21A6NL26 309 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 AQP7P3A6NL99 342 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 SBK3P0C264 359 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 UBE2KP61086 200 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 KCNAB1Q14722 419 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 ACOT6Q3I5F7 207 aaPredicted RBP14.13□□□□□ -0.15
GNE-202ENST00000396594 TIGITQ495A1 244 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 VHLLQ6RSH7 139 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 ANKRD53Q8N9V6 530 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 SLC30A7Q8NEW0 376 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 PXT1Q8NFP0 134 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 OR2A5Q96R48 311 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 SIGLEC11Q96RL6 698 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 ZNF768Q9H5H4 540 aaKnown RBP14.13□□□□□ -0.15
GNE-202ENST00000396594 C12orf49Q9H741 205 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 LINC01565O15544 149 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 XRCC3O43542 346 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 GALR2O43603 387 aaPredicted RBP14.13□□□□□ -0.15
GNE-202ENST00000396594 GP1BAP07359 652 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 ZNF17P17021 662 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 SNRPD2P62316 118 aaKnown RBP14.13□□□□□ -0.15
GNE-202ENST00000396594 ANKRD16Q6P6B7 361 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 OR2G2Q8NGZ5 317 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 MMP25Q9NPA2 562 aa14.13□□□□□ -0.15
GNE-202ENST00000396594 B4E171 279 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 M0QZ24 198 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 GFERP55789 205 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 DEFB109BQ30KR1 87 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 LRRC10Q5BKY1 277 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 TMEM99Q8N816 258 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 NEIL1Q96FI4 390 aaPredicted RBP14.12□□□□□ -0.15
GNE-202ENST00000396594 SERTAD4Q9NUC0 356 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 FXYD1O00168 92 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 BHLHE40O14503 412 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 LIMS3P0CW19 117 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 LIMS4P0CW20 117 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 TMEM31Q5JXX7 168 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 D2HGDHQ8N465 521 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 HSD17B8Q92506 261 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 NDFIP1Q9BT67 221 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 C11orf54Q9H0W9 315 aaPredicted RBP14.12□□□□□ -0.15
GNE-202ENST00000396594 MEIS3P1A6NDR6 274 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 FOLR1P15328 257 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 MMP15P51511 669 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 PRICKLE4Q2TBC4 344 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 ACSM5Q6NUN0 579 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 ACOT7LQ6ZUV0 252 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 MAP6Q96JE9 813 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 GPR173Q9NS66 373 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 TRGV10A0A0A0MS01 117 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 NAT2P11245 290 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 CDK5Q00535 292 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.12□□□□□ -0.15
GNE-202ENST00000396594 PINX1Q96BK5 328 aaKnown RBP14.12□□□□□ -0.15
GNE-202ENST00000396594 ADTRPQ96IZ2 230 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 RAB33BQ9H082 229 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 LANCL2Q9NS86 450 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 NTNG1Q9Y2I2 539 aa14.12□□□□□ -0.15
GNE-202ENST00000396594 FUCA1P04066 466 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 FBP1P09467 338 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 RAB1AP62820 205 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 ETFRF1Q6IPR1 90 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 FAM199XQ6PEV8 388 aaPredicted RBP14.11□□□□□ -0.15
GNE-202ENST00000396594 STAC2Q6ZMT1 411 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 ARV1Q9H2C2 271 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 GALNT9Q9HCQ5 603 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 FKBP11Q9NYL4 201 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 MPC1Q9Y5U8 109 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 BOLA2-SMG1P6H3BVE0 249 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 DEFA4P12838 97 aa14.11□□□□□ -0.15
GNE-202ENST00000396594 EVX1P49640 407 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms