RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RBBP9O75884 186 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 VAMP5O95183 116 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 CD37P11049 281 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 CNR1P21554 472 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 MSR1P21757 451 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 GUCA1AP43080 201 aaPredicted RBP13.28□□□□□ -0.28
GPC3-202ENST00000394299 VEGFCP49767 419 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 SRYQ05066 204 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 OR1M1Q8NGA1 313 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 OR6M1Q8NGM8 313 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 PHF21AQ96BD5 680 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 CMBLQ96DG6 245 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 B3GNT4Q9C0J1 378 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 MED28Q9H204 178 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 OR51J1Q9H342 316 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 NELFAQ9H3P2 528 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 FLVCR1Q9Y5Y0 555 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 C7orf66A4D0T2 115 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 WIPF3A6NGB9 483 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 TTLL8A6PVC2 850 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 H7C417 338 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 ARPC1BO15143 372 aaKnown RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 PSMB1P20618 241 aaKnown RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 BDKRB2P30411 391 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 MNDAP41218 407 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 POU4F3Q15319 338 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 TRIP6Q15654 476 aaKnown RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 C10orf128Q5T292 105 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 DNM1P46Q6ZS02 220 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 SLC7A5P1Q8MH63 180 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 PAQR4Q8N4S7 273 aaPredicted RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 ACBD4Q8NC06 268 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 ADAMTS17Q8TE56 1095 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 ADGRG7Q96K78 797 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 C7orf50Q9BRJ6 194 aaKnown RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 GPR87Q9BY21 358 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 MOV10Q9HCE1 1003 aaKnown RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 MTFP1Q9UDX5 166 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 PRRC2CQ9Y520 2896 aaKnown RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 LAMA5O15230 3695 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 A6NL46 340 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 ZNF716A6NP11 495 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 FAM166BA8MTA8 275 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 LDLRAD4O15165 306 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 ECDO95905 644 aaPredicted RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 GSTT2P0CG29 244 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 GSTT2BP0CG30 244 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 POU3F2P20265 443 aaPredicted RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 PRSS12P56730 875 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 SCAND1P57086 179 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 C1orf100Q5SVJ3 147 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 ABHD17BQ5VST6 288 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 C20orf196Q8IYI0 205 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 TCTE3Q8IZS6 198 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 ABHD3Q8WU67 409 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 LYZL4Q96KX0 146 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 ALKBH3Q96Q83 286 aaPredicted RBP13.27□□□□□ -0.29
GPC3-202ENST00000394299 CRLF2Q9HC73 371 aa13.27□□□□□ -0.29
GPC3-202ENST00000394299 OTOGLQ3ZCN5 2332 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 MEGF11A6BM72 1044 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 IGHV3-9P01782 118 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 SLC6A9P48067 706 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 Q6ZTK2 550 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 SULF2Q8IWU5 870 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 SUMF1Q8NBK3 374 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 CDC6Q99741 560 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 OR2B2Q9GZK3 357 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 PARD6AQ9NPB6 346 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 ING3Q9NXR8 418 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 RABL2AQ9UBK7 228 aaPredicted RBP13.26□□□□□ -0.29
GPC3-202ENST00000394299 ZNF222Q9UK12 451 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 RABL2BQ9UNT1 228 aa13.26□□□□□ -0.29
GPC3-202ENST00000394299 LOC390937A0A1W2PQ73 354 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 GJE1A6NN92 205 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 ANXA7P20073 488 aaKnown RBP13.25□□□□□ -0.29
GPC3-202ENST00000394299 PRSS3P35030 304 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 RAD52P43351 418 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 GFRA1P56159 465 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 LSM6P62312 80 aaKnown RBP13.25□□□□□ -0.29
GPC3-202ENST00000394299 UNC119Q13432 240 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 OR1C1Q15619 314 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 IL22RA1Q8N6P7 574 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 OR2M7Q8NG81 312 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 OR5D14Q8NGL3 314 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 OR4C16Q8NGL9 310 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 OR56B4Q8NH76 319 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 OR2V1Q8NHB1 315 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 KCNE4Q8WWG9 221 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 SEC22CQ9BRL7 303 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 NOX3Q9HBY0 568 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 TMEM138Q9NPI0 162 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 COPZ2Q9P299 210 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 ZNF407Q9C0G0 2248 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 C21orf140B9A014 251 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 FABP7O15540 132 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 AKR7A2O43488 359 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 CD3DP04234 171 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 ITGB2P05107 769 aa13.25□□□□□ -0.29
GPC3-202ENST00000394299 ZNF20P17024 532 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms