RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 IRF2P14316 349 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 IER3P46695 156 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 COX10Q12887 443 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 MEP1BQ16820 701 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 ADCK1Q86TW2 530 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 GJC3Q8NFK1 279 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 OR2T12Q8NG77 320 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 OR11L1Q8NGX0 322 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 TBC1D15Q8TC07 691 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 TRIM15Q9C019 465 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 NUAK2Q9H093 628 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 UFSP2Q9NUQ7 469 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 KIF17Q9P2E2 1029 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 SIGLEC7Q9Y286 467 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 NBEAL2Q6ZNJ1 2754 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 A0A0G2JND7 137 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 BBIP1A8MTZ0 92 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 LGALS8O00214 317 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 EDF1O60869 148 aaKnown RBP12.7□□□□□ -0.38
CHMP3-202ENST00000393773 PTBP3O95758 552 aaKnown RBP12.7□□□□□ -0.38
CHMP3-202ENST00000393773 NPPAP01160 153 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 ACSM4P0C7M7 580 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 METTL11BQ5VVY1 283 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 METTL21CQ5VZV1 264 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 CD276Q5ZPR3 534 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 GPR139Q6DWJ6 353 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 CORO6Q6QEF8 472 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 CFAP77Q6ZQR2 320 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 Q6ZSV7 163 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 ZSCAN4Q8NAM6 433 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-202ENST00000393773 LZICQ8WZA0 190 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 LHX4Q969G2 390 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 FAM46AQ96IP4 442 aaKnown RBP12.7□□□□□ -0.38
CHMP3-202ENST00000393773 SIKE1Q9BRV8 207 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 HCAR1Q9BXC0 346 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 NDEL1Q9GZM8 345 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 TCF7L1Q9HCS4 588 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 GMPR2Q9P2T1 348 aaKnown RBP12.7□□□□□ -0.38
CHMP3-202ENST00000393773 RPS6KA6Q9UK32 745 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 ZNF281Q9Y2X9 895 aa12.7□□□□□ -0.38
CHMP3-202ENST00000393773 IGLV1-36A0A0B4J1U3 117 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 ELOVL7A1L3X0 281 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 SOCS2O14508 198 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 NDUFB2O95178 105 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 TXNDC12O95881 172 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 LIPFP07098 398 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 PGM2L1Q6PCE3 622 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 TSEN54Q7Z6J9 526 aaKnown RBP12.69□□□□□ -0.38
CHMP3-202ENST00000393773 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-202ENST00000393773 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 PNLDC1Q8NA58 520 aaKnown RBP12.69□□□□□ -0.38
CHMP3-202ENST00000393773 TSSK2Q96PF2 358 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 PNRC2Q9NPJ4 139 aaKnown RBP12.69□□□□□ -0.38
CHMP3-202ENST00000393773 ERVK-18Q9QC07 812 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 RNF7Q9UBF6 113 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 TMEM5Q9Y2B1 443 aa12.69□□□□□ -0.38
CHMP3-202ENST00000393773 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 ADAM20O43506 726 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 PTP4A3O75365 173 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 PPP1R3DO95685 299 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 ANOS1P23352 680 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 CDKN2AP42771 156 aaKnown RBP12.68□□□□□ -0.38
CHMP3-202ENST00000393773 DBPQ10586 325 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-202ENST00000393773 C2orf68Q2NKX9 166 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 HIST2H2BDQ6DRA6 164 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 SFRP4Q6FHJ7 346 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-202ENST00000393773 SLC18B1Q6NT16 456 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 SLC26A10Q8NG04 563 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 FAM110DQ8TAY7 271 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-202ENST00000393773 SLC7A13Q8TCU3 470 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 RSRC1Q96IZ7 334 aaKnown RBP12.68□□□□□ -0.38
CHMP3-202ENST00000393773 HSH2DQ96JZ2 352 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 ADAT1Q9BUB4 502 aaKnown RBP12.68□□□□□ -0.38
CHMP3-202ENST00000393773 TMEM120AQ9BXJ8 343 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 ANKRD19PQ9H560 264 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 C16orf95Q9H693 158 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 FN3KRPQ9HA64 309 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
CHMP3-202ENST00000393773 ZNRD1Q9P1U0 126 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 IER3IP1Q9Y5U9 82 aa12.68□□□□□ -0.38
CHMP3-202ENST00000393773 OOEPA6NGQ2 149 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 ZNF682O95780 498 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 CA6P23280 308 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 TRAP1Q12931 704 aaKnown RBP12.67□□□□□ -0.38
CHMP3-202ENST00000393773 KLF10Q13118 480 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 OR8G1Q15617 311 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 KCNJ8Q15842 424 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 BEAN1Q3B7T3 259 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 IFI44LQ53G44 452 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 DNM1P34Q6PK57 102 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 GDPGP1Q6ZNW5 385 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 PGAP1Q75T13 922 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 NAA40Q86UY6 237 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 FAM90A1Q86YD7 464 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 LINC00346Q8IVM7 164 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 ATF6BQ99941 703 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 SEMA6AQ9H2E6 1030 aa12.67□□□□□ -0.38
CHMP3-202ENST00000393773 CMTM6Q9NX76 183 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms