RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 TNFRSF10AO00220 468 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 EFSO43281 561 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 CCNKO75909 580 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 CSN2P05814 226 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 CYC1P08574 325 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 FAHP16930 419 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 GUCA1AP43080 201 aaPredicted RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 ZNF239Q16600 458 aaKnown RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 PLET1Q6UQ28 207 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 TOMM5Q8N4H5 51 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 OR5M9Q8NGP3 310 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 OR10K1Q8NGX5 313 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 AGAP4Q96P64 663 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 FAM173AQ9BQD7 235 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 TP63Q9H3D4 680 aaPredicted RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 BANF2Q9H503 90 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 PHYHO14832 338 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 KRT33AO76009 404 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 CASRP41180 1078 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 MAP2K6P52564 334 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 CLDN18P56856 261 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 CBX3Q13185 183 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 TSC22D1Q15714 1073 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 CCDC92Q53HC0 331 aaPredicted RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 UBE2NLQ5JXB2 153 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 OLFML2AQ68BL7 652 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 ZNF454Q8N9F8 522 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 DRAXINQ8NBI3 349 aaPredicted RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 DACT3Q96B18 629 aaPredicted RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 PRRG4Q9BZD6 226 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 FANCFQ9NPI8 374 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 SLC7A10Q9NS82 523 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 RBFOX1Q9NWB1 397 aaKnown RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 FOXD3Q9UJU5 478 aaPredicted RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 ADAM30Q9UKF2 790 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 BOKQ9UMX3 212 aaPredicted RBP8.92□□□□□ -0.98
LTN1-203ENST00000389195 ALG5Q9Y673 324 aa8.92□□□□□ -0.98
LTN1-203ENST00000389195 LOC100509620A0A075B734 347 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 CDRT15L2A8MXV6 281 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 ZNF878C9JN71 531 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 TLX3O43711 291 aaPredicted RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 EIF1BO60739 113 aaKnown RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 HLA-HP01893 362 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 FAM157BP0CG42 384 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 ZNF32P17041 273 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 CSRP1P21291 193 aaKnown RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 MSR1P21757 451 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 ART1P52961 327 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 BLVRAP53004 296 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 TBRG1Q3YBR2 411 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 C3P1Q6ZMU1 363 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 C1QL2Q7Z5L3 287 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 SKA3Q8IX90 412 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 HAVCR2Q8TDQ0 301 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 KIAA1143Q96AT1 154 aaPredicted RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 SNX18Q96RF0 628 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 NICN1Q9BSH3 213 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 NAA11Q9BSU3 229 aaPredicted RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 NELFAQ9H3P2 528 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 RNF121Q9H920 327 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 ZNF275Q9NSD4 429 aaPredicted RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 ZNF581Q9P0T4 197 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 ABRACLQ9P1F3 81 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 STEAP1Q9UHE8 339 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 IGHV3-64DA0A0J9YX35 117 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 ARSBP15848 533 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 CFL1P23528 166 aaKnown RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 MAPK3P27361 379 aaPredicted RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 MMP16P51512 607 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 CCR9P51686 369 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 SOX8P57073 446 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 AGAP6Q5VW22 663 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 SLC25A25Q6KCM7 469 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 NUFIP2Q7Z417 695 aaKnown RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 AKAP14Q86UN6 197 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 ELMOD2Q8IZ81 293 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 TMEM104Q8NE00 496 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 PIGTQ969N2 578 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 KCTD12Q96CX2 325 aaKnown RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 S100A16Q96FQ6 103 aaKnown RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 SPRR3Q9UBC9 169 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 CACNG2Q9Y698 323 aa8.91□□□□□ -0.98
LTN1-203ENST00000389195 ASH1LQ9NR48 2969 aaKnown RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 INTS1Q8N201 2190 aaKnown RBP8.91□□□□□ -0.98
LTN1-203ENST00000389195 WIPF3A6NGB9 483 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 PDCD5O14737 125 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 CTAG2O75638 210 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 UBL3O95164 117 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 HRGP04196 525 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 CD2P06729 351 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 HTR2CP28335 458 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 OR3A4PP47883 348 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 TAS2R20P59543 309 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 FAPQ12884 760 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 PDCD1Q15116 288 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 ZNF766Q5HY98 468 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 PYHIN1Q6K0P9 492 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 TMEM81Q6P7N7 255 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 OR4S1Q8NGB4 309 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 TMEM54Q969K7 222 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms