RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 OR52I1Q8NGK6 324 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 NUDT8Q8WV74 236 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 DUSP22Q9NRW4 184 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 RAB22AQ9UL26 194 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 USP3Q9Y6I4 520 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 HSPE1-MOB4S4R3N1 261 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 IDSB3KWA1 339 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 EIF3FO00303 357 aaPredicted RBP11.31□□□□□ -0.6
CHD3-203ENST00000380358 LIM2P55344 173 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 LYG1Q8N1E2 194 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 SARAFQ96BY9 339 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 ALKBH3Q96Q83 286 aaPredicted RBP11.31□□□□□ -0.6
CHD3-203ENST00000380358 GABARAPL1Q9H0R8 117 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 GPR84Q9NQS5 396 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 MUTYHQ9UIF7 546 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 FRMPD1Q5SYB0 1578 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 IGHV3-21A0A0B4J1V1 117 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 PLAUP00749 431 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 ADGRE4PQ86SQ3 457 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 C20orf196Q8IYI0 205 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 OR10Z1Q8NGY1 313 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 ACTR3CQ9C0K3 210 aaPredicted RBP11.31□□□□□ -0.6
CHD3-203ENST00000380358 CHST8Q9H2A9 424 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 MED17Q9NVC6 651 aa11.31□□□□□ -0.6
CHD3-203ENST00000380358 TRGV10A0A0A0MS01 117 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 A0A1W2PPQ1 181 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ATP6V1G2-DDX39BF2Z307 99 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 LINC01565O15544 149 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 FCGR2CP31995 323 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 HNRNPA3P51991 378 aaKnown RBP11.3□□□□□ -0.6
CHD3-203ENST00000380358 YPEL5P62699 121 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 CYHR1Q6ZMK1 362 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ISG20Q96AZ6 181 aaKnown RBP11.3□□□□□ -0.6
CHD3-203ENST00000380358 FCRL1Q96LA6 429 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 CENPOQ9BU64 300 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 RABAC1Q9UI14 185 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 UMAD1C9J7I0 102 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 POLR2IP36954 125 aaKnown RBP11.3□□□□□ -0.6
CHD3-203ENST00000380358 ZDHHC23Q8IYP9 409 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 SLC16A11Q8NCK7 471 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 NUP37Q8NFH4 326 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 OR2T11Q8NH01 316 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 SLAMF6Q96DU3 332 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 UBE2ZQ9H832 354 aaPredicted RBP11.3□□□□□ -0.6
CHD3-203ENST00000380358 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
CHD3-203ENST00000380358 K7EQS6 105 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ZNF195O14628 629 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 RHBDL1O75783 438 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 OR2T7P0C7T2 308 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 RAB5AP20339 215 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ARR3P36575 388 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ZNF85Q03923 595 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 COMMD1Q8N668 190 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 LINC00469Q8N7U9 141 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 OR1B1Q8NGR6 318 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 NAA50Q9GZZ1 169 aaKnown RBP11.3□□□□□ -0.6
CHD3-203ENST00000380358 ADGRL4Q9HBW9 690 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 TBC1D29Q9UFV1 150 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ZNF346Q9UL40 294 aaKnown RBP11.3□□□□□ -0.6
CHD3-203ENST00000380358 ATRNO75882 1429 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 USP32Q8NFA0 1604 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 M0R1X1 148 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 KRASP01116 189 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 PAX5Q02548 391 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 SLC25A26Q70HW3 274 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 OR4C5Q8NGB2 326 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 SLCO2A1Q92959 643 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 C20orf141Q9NUB4 165 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 DUS4LO95620 317 aaKnown RBP11.3□□□□□ -0.6
CHD3-203ENST00000380358 TSPAN12O95859 305 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 SDHBP21912 280 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 GPX3P22352 226 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 TSPAN31Q12999 210 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 CSF3RQ99062 836 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 PRDM14Q9GZV8 571 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 M0R135 149 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 LYZL6O75951 148 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 TTRP02766 147 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 Q499Y3 187 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 TMEM81Q6P7N7 255 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ORAI1Q96D31 301 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ZNF799Q96GE5 643 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 FOXC2Q99958 501 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 ADAM29Q9UKF5 820 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 POLDIP2Q9Y2S7 368 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 TIMM10BQ9Y5J6 103 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 SNX11Q9Y5W9 270 aa11.3□□□□□ -0.6
CHD3-203ENST00000380358 RFPL4AA6NLU0 287 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 CLDN24A6NM45 220 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 RFPL4AL1F8VTS6 287 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 TRIM23P36406 574 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 SRPXP78539 464 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 HFEQ30201 348 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 CLDN22Q8N7P3 220 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 CELF2-AS1Q8N7Q2 184 aa11.29□□□□□ -0.6
CHD3-203ENST00000380358 OR2I1PQ8NGU4 316 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms