RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 RAB39BQ96DA2 213 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 ZNF799Q96GE5 643 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 C2orf50Q96LR7 162 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 NARFLQ9H6Q4 476 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 FBXO34Q9NWN3 711 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 FBXO4Q9UKT5 387 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 FOXJ3Q9UPW0 622 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 CACNA1IQ9P0X4 2223 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 TRPM6Q9BX84 2022 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 KIF13BQ9NQT8 1826 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 CKAP5Q14008 2032 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 DOCK1Q14185 1865 aa10.44□□□□□ -0.74
PTCH1-203ENST00000375274 OR6C76A6NM76 312 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 PRSS44E7EML9 344 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 CTSVO60911 334 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 CD37P11049 281 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 SLC25A1P53007 311 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 F2RL1P55085 397 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 HLXQ14774 488 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 TMEM128Q5BJH2 165 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 OR51A2Q8NGJ7 313 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 KTI12Q96EK9 354 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 PLEKHA2Q9HB19 425 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 DCTN6O00399 190 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 AQP8O94778 261 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 OR5H8P0DN80 308 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 KITLGP21583 273 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 AADACP22760 399 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 RAB11AP62491 216 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 TMEM182Q6ZP80 229 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 RPS19BP1Q86WX3 136 aaKnown RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 OR1S2Q8NGQ3 325 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 C22orf15Q8WYQ4 148 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 C4orf45Q96LM5 186 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 OTOL1A6NHN0 477 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 ZNF814B7Z6K7 855 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 HOXB3P14651 431 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 SSX2Q16385 188 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 WDR38Q5JTN6 314 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 OR52W1Q6IF63 320 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 PLXDC2Q6UX71 529 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 MUC20Q8N307 709 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 DTWD2Q8NBA8 298 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 FBXW5Q969U6 566 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 ZC3HAV1LQ96H79 300 aaKnown RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 MT-ND4LP03901 98 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 RPA2P15927 270 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 GFERP55789 205 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 OR2B8PP59922 312 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 ADIRFQ15847 76 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 ARRDC1Q8N5I2 433 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 SPICQ8N5J4 248 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 OR51H1Q8NH63 302 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 ZNF764Q96H86 408 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-203ENST00000375274 SERGEFQ9UGK8 458 aa10.43□□□□□ -0.74
PTCH1-203ENST00000375274 E5RGE8 158 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 NXPH3O95157 252 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 TMEM71Q6P5X7 295 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 ANKRD16Q6P6B7 361 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 HIST2H3AQ71DI3 136 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 ABHD5Q8WTS1 349 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 LIN37Q96GY3 246 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-203ENST00000375274 PLK3Q9H4B4 646 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 FN3KRPQ9HA64 309 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 GNG12Q9UBI6 72 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 PISDQ9UG56 409 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 FRG2CA6NGY1 282 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 OR2C1O95371 312 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 ADRA2CP18825 462 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 CXCL3P19876 107 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 ARG2P78540 354 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 DMKNQ6E0U4 476 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-203ENST00000375274 CNEP1R1Q8N9A8 125 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 MRPL38Q96DV4 380 aaKnown RBP10.42□□□□□ -0.74
PTCH1-203ENST00000375274 OR2A5Q96R48 311 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 C12orf57Q99622 126 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 CCDC88CQ9P219 2028 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 PLSCR5A0PG75 271 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 ZFP36L2P47974 494 aaKnown RBP10.42□□□□□ -0.74
PTCH1-203ENST00000375274 DHRS2Q13268 280 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 SLC25A30Q5SVS4 291 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 VN1R4Q7Z5H5 301 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 ARHGEF39Q8N4T4 335 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 UQCC2Q9BRT2 126 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 CALHM2Q9HA72 323 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 DNAJB12Q9NXW2 375 aaKnown RBP10.42□□□□□ -0.74
PTCH1-203ENST00000375274 MYOTQ9UBF9 498 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 NDRG3Q9UGV2 375 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 LHX6Q9UPM6 363 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 LRP12Q9Y561 859 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTCH1-203ENST00000375274 BAXQ07812 192 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 CDONQ4KMG0 1287 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 TFAP2EQ6VUC0 442 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 SSX9Q7RTT3 188 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 PRSS41Q7RTY9 318 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 LRRTM1Q86UE6 522 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 BATF2Q8N1L9 274 aa10.42□□□□□ -0.74
PTCH1-203ENST00000375274 BHLHE23Q8NDY6 225 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms