RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TTTY10Q9BZA0 68 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 IRF2BPLQ9H1B7 796 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 C20orf85Q9H1P6 137 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 ATG5Q9H1Y0 275 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 OPA3Q9H6K4 179 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 AUNIPQ9H7T9 357 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 NOX3Q9HBY0 568 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 PROK2Q9HC23 129 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 GTF2A1LQ9UNN4 478 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 PLEKHA6Q9Y2H5 1048 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 KLF13Q9Y2Y9 288 aaPredicted RBP7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 LHFPL6Q9Y693 200 aa7.72□□□□□ -1.17
SNRNP40-202ENST00000373720 LNP1A1A4G5 178 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 DISC1C4P0D8 188 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 RPL36A-HNRNPH2H7BZ11 118 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 J3QW42 95 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 SIAH2O43255 324 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 LANCL1O43813 399 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 SSX4O60224 188 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 CYTIPO60759 359 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 CD74P04233 296 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 GIPP09681 153 aaPredicted RBP7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 PRF1P14222 555 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 PRKACBP22694 351 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF93P35789 620 aaPredicted RBP7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 PMELP40967 661 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 CLDN17P56750 224 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 RAP2BP61225 183 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 FGL1Q08830 312 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 RAB35Q15286 201 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 RNPS1Q15287 305 aaKnown RBP7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 GFOD2Q3B7J2 385 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 C1QTNF12Q5T7M4 302 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 ABLIM2Q6H8Q1 611 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF627Q7L945 461 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF100Q8IYN0 542 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 CLEC1AQ8NC01 280 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 OR14L1PQ8NHC6 308 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 ULBP2Q9BZM5 246 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 OR10A2Q9H208 303 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 EXO5Q9H790 373 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 ACKR4Q9NPB9 350 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 PRDM6Q9NQX0 595 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 ASH2LQ9UBL3 628 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 TIMM10BQ9Y5J6 103 aa7.71□□□□□ -1.18
SNRNP40-202ENST00000373720 ASCC3Q8N3C0 2202 aaKnown RBP7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 TRAV18A0A075B6X5 111 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A0B4J293 547 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 PIGBOS1A0A0B4J2F0 54 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A1B0GTI1 187 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM272A0A1B0GTI8 110 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A1W2PNR3 127 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 OR6C6A6NF89 314 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 TUBAL3A6NHL2 446 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 POM121CA8CG34 1229 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF724A8MTY0 619 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 SSNA1O43805 119 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 DHRS3O75911 302 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 WNT11O96014 354 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 IL11P20809 199 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 OTX2P32243 289 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 SFTPDP35247 375 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 CX3CR1P49238 355 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 GFRA1P56159 465 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 B3GALT5-AS1P59052 145 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 FMODQ06828 376 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 MFGE8Q08431 387 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 PCGF3Q3KNV8 242 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 PRAMEF20Q5VT98 475 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 STEAP1BQ6NZ63 245 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 C11orf88Q6PI97 169 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 LRRC69Q6ZNQ3 347 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 SLC16A14Q7RTX9 510 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF584Q8IVC4 421 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 LINC00346Q8IVM7 164 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 CCDC36Q8IYA8 594 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 KDM8Q8N371 416 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 ARRDC1Q8N5I2 433 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 JAGN1Q8N5M9 183 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF283Q8N7M2 679 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 ZDHHC22Q8N966 263 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 OR51A4Q8NGJ6 313 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 AQP3Q92482 292 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 SNAPC3Q92966 411 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 FGGYQ96C11 551 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 RNF170Q96K19 258 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 ADGRG7Q96K78 797 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 NECAB3Q96P71 396 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 GNRHR2Q96P88 292 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 S100A13Q99584 98 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 EMC6Q9BV81 110 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 AKIRIN1Q9H9L7 192 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 RANGRFQ9HD47 186 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 GLRX2Q9NS18 164 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 TAS2R4Q9NYW5 299 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 LRFN1Q9P244 771 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 EDARQ9UNE0 448 aa7.7□□□□□ -1.18
SNRNP40-202ENST00000373720 V9GYS6 101 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms