RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 TRAP1Q12931 704 aaKnown RBP10.97□□□□□ -0.65
RPF1-201ENST00000370654 RBMS3Q6XE24 437 aaKnown RBP10.97□□□□□ -0.65
RPF1-201ENST00000370654 ZBTB46Q86UZ6 589 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 OR5L1Q8NGL2 311 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 SLCO4A1Q96BD0 722 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 UPRTQ96BW1 309 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 PYURFQ96I23 114 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 DDOQ99489 341 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 PITX2Q99697 317 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 IFT27Q9BW83 186 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 NDEL1Q9GZM8 345 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 MS4A7Q9GZW8 240 aaPredicted RBP10.97□□□□□ -0.65
RPF1-201ENST00000370654 GORASP2Q9H8Y8 452 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 SPAG4Q9NPE6 437 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 UFSP2Q9NUQ7 469 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 TMEM100Q9NV29 134 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 CYB5R1Q9UHQ9 305 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 SAMD4AQ9UPU9 718 aaKnown RBP10.97□□□□□ -0.65
RPF1-201ENST00000370654 TVP23AA6NH52 213 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 RNASE1P07998 156 aaKnown RBP10.96□□□□□ -0.65
RPF1-201ENST00000370654 OMGP23515 440 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 SLC6A6P31641 620 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 GNB2P62879 340 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 FOXL1Q12952 345 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 ZNF181Q2M3W8 571 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 SNAI3Q3KNW1 292 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 PRR31Q5SQ13 230 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 ZNF362Q5T0B9 420 aaPredicted RBP10.96□□□□□ -0.65
RPF1-201ENST00000370654 BRD3OSQ6XYD6 125 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 FITM2Q8N6M3 262 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 CYB561A3Q8NBI2 242 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 OR2AE1Q8NHA4 323 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 NEIL1Q96FI4 390 aaPredicted RBP10.96□□□□□ -0.65
RPF1-201ENST00000370654 ATF6BQ99941 703 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 EGLN3Q9H6Z9 239 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 UNKLQ9H9P5 680 aaKnown RBP10.96□□□□□ -0.65
RPF1-201ENST00000370654 CTSZQ9UBR2 303 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 MIOXQ9UGB7 285 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 CD300AQ9UGN4 299 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 TMCC3Q9ULS5 477 aa10.96□□□□□ -0.65
RPF1-201ENST00000370654 DOCK11Q5JSL3 2073 aa10.96□□□□□ -0.66
RPF1-201ENST00000370654 MEGF8Q7Z7M0 2845 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 KIR2DS1A0A191URI9 304 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 OR10H3O60404 316 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 RENP00797 406 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 LCATP04180 440 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 MDKP21741 143 aaPredicted RBP10.95□□□□□ -0.66
RPF1-201ENST00000370654 CA6P23280 308 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 RRM2P31350 389 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 GATA4P43694 442 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 PITPNBP48739 271 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 FGF12P61328 243 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.95□□□□□ -0.66
RPF1-201ENST00000370654 SRSF4Q08170 494 aaKnown RBP10.95□□□□□ -0.66
RPF1-201ENST00000370654 KRT72Q14CN4 511 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 DEFB112Q30KQ8 113 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 WDR25Q64LD2 544 aaPredicted RBP10.95□□□□□ -0.66
RPF1-201ENST00000370654 RUSC1-AS1Q66K80 236 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 PGBD2Q6P3X8 592 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 DNM1P34Q6PK57 102 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 LRRN1Q6UXK5 716 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 ZNF620Q6ZNG0 422 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 C9orf139Q6ZV77 190 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 OR51L1Q8NGJ5 315 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 OR8D4Q8NGM9 314 aa10.95□□□□□ -0.66
RPF1-201ENST00000370654 NUDT16L1Q9BRJ7 211 aaKnown RBP10.95□□□□□ -0.66
RPF1-201ENST00000370654 IFNL4K9M1U5 179 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 NDUFAB1O14561 156 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 TNFRSF13BO14836 293 aaPredicted RBP10.94□□□□□ -0.66
RPF1-201ENST00000370654 ARPC2O15144 300 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 HLA-DQA2P01906 255 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 SFTPBP07988 381 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 PRDX6P30041 224 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 PSMB10P40306 273 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 CD200P41217 278 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 ELF3P78545 371 aaPredicted RBP10.94□□□□□ -0.66
RPF1-201ENST00000370654 ZNF92Q03936 586 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 PPP1R8Q12972 351 aaKnown RBP10.94□□□□□ -0.66
RPF1-201ENST00000370654 GLYATL3Q5SZD4 288 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 SFRP4Q6FHJ7 346 aaPredicted RBP10.94□□□□□ -0.66
RPF1-201ENST00000370654 PGM2L1Q6PCE3 622 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 SHISA2Q6UWI4 295 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 BTNL3Q6UXE8 466 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 BOLLQ8N9W6 283 aaKnown RBP10.94□□□□□ -0.66
RPF1-201ENST00000370654 OR9Q2Q8NGE9 314 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 OR8B3Q8NGG8 313 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 Q8TCH9 128 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 CMTM5Q96DZ9 223 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 OR8B2Q96RD0 313 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 HCAR1Q9BXC0 346 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 FAM107BQ9H098 131 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 RASSF4Q9H2L5 321 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 TNFRSF19Q9NS68 423 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 PKD1L1Q8TDX9 2849 aa10.94□□□□□ -0.66
RPF1-201ENST00000370654 CD300LBA8K4G0 201 aa10.93□□□□□ -0.66
RPF1-201ENST00000370654 C3orf80F5H4A9 247 aa10.93□□□□□ -0.66
RPF1-201ENST00000370654 CLDN34H7C241 214 aa10.93□□□□□ -0.66
RPF1-201ENST00000370654 M0R135 149 aa10.93□□□□□ -0.66
RPF1-201ENST00000370654 BHLHE40O14503 412 aa10.93□□□□□ -0.66
RPF1-201ENST00000370654 HOXA3O43365 443 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms