RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 MVDP53602 400 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CDH12P55289 794 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CDK6Q00534 326 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 TGM3Q08188 693 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 PJVKQ0ZLH3 352 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ACSM5Q6NUN0 579 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 MTFR2Q6P444 385 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SLC30A7Q8NEW0 376 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 OR56B1Q8NGI3 324 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 LYPD6BQ8NI32 183 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 GALNT14Q96FL9 552 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 FAM71F1Q96KD3 344 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 IP6K3Q96PC2 410 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 TMEM27Q9HBJ8 222 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 RHCGQ9UBD6 479 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 TNFSF18Q9UNG2 199 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CORO2BQ9UQ03 480 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 MOKQ9UQ07 419 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 EXOSC1Q9Y3B2 195 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ATRXP46100 2492 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 HELZ2Q9BYK8 2649 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 METTL21EPA6NDL7 271 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CREBL2O60519 120 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SLC25A12O75746 678 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 TOXO94900 526 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ZIC2O95409 532 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 HLA-DPB1P04440 258 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SLC35G6P0C7Q6 338 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 NFYBP25208 207 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ANXA11P50995 505 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 H2BFSP57053 126 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 TRA2BP62995 288 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SPOCK1Q08629 439 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 RAB40BQ12829 278 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 GAMTQ14353 236 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 RGNQ15493 299 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SURF2Q15527 256 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 NDUFA9Q16795 377 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 DEFB134Q4QY38 66 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 COX20Q5RI15 118 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 IDNKQ5T6J7 187 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CYB5R2Q6BCY4 276 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 WDR53Q7Z5U6 358 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 OR4N5Q8IXE1 308 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 OR1J4Q8NGS1 313 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 OR13D1Q8NGV5 346 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 OR4Q3Q8NH05 313 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 EXTL1Q92935 676 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 MR1Q95460 341 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 TMEM203Q969S6 136 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 C3orf49Q96BT1 292 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF775Q96BV0 537 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SAT2Q96F10 170 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 PADI1Q9ULC6 663 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ANGPT4Q9Y264 503 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 TMEM269A0A1B0GVZ9 245 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 PINLYPA6NC86 204 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 OR6C76A6NM76 312 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 DVL1O14640 695 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 EREGO14944 169 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 EEF1E1O43324 174 aaKnown RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 OR10H2O60403 315 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 IGHEP01854 428 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CD74P04233 296 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CD2P06729 351 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 PCGF2P35227 344 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 BUD31P41223 144 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 UCP2P55851 309 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 RAB38P57729 211 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 LASP1Q14847 261 aaKnown RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 PLEKHN1Q494U1 663 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CDK20Q8IZL9 346 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 HIST3H2BBQ8N257 126 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 RELL2Q8NC24 303 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 OR8J1Q8NGP2 316 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 STT3BQ8TCJ2 826 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 C22orf15Q8WYQ4 148 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 RERGQ96A58 199 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 CLCC1Q96S66 551 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 S100A13Q99584 98 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 FUZQ9BT04 418 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 DOHHQ9BU89 302 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 SIRT3Q9NTG7 399 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 DEPPQ9NTK1 212 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 SH3BGRL2Q9UJC5 107 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 TNFRSF11BO00300 401 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ARPC5O15511 151 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 KLK10O43240 276 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 NME2P1O60361 137 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 NDUFB6O95139 128 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 ADAP00813 363 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 NME2P22392 152 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 OMPP47874 163 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 EIF5AP63241 154 aaKnown RBP6.11□□□□□ -1.43
CSDE1-204ENST00000369530 DLK1P80370 383 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 TRAM1Q15629 374 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 DEFB110Q30KQ9 67 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 MAJINQ3KP22 176 aa6.11□□□□□ -1.43
CSDE1-204ENST00000369530 PAPD4Q6PIY7 484 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms