RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 DNASE2O00115 360 aaPredicted RBP2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 CHMP2AO43633 222 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 CDC40O60508 579 aaKnown RBP eCLIP2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 ENTPD5O75356 428 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 GCM2O75603 506 aaPredicted RBP2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 PGAM1P18669 254 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 MAGP20916 626 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 CFHR2P36980 270 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 TAS2R39P59534 338 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 ESRRGP62508 458 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 LCN2P80188 198 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 DGCR6Q14129 220 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 FAM83EQ2M2I3 478 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 TPRG1LQ5T0D9 272 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 TMEM205Q6UW68 189 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 NTM-AS1Q6ZSK4 140 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 UNC93AQ86WB7 457 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 PGAM4Q8N0Y7 254 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 TRAM1L1Q8N609 369 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 OR5W2Q8NH69 310 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 C15orf40Q8WUR7 153 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF285Q96NJ3 590 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 TIMM17AQ99595 171 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 PLA2G2FQ9BZM2 168 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 C12orf10Q9HB07 376 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 SLC17A7Q9P2U7 560 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 LRP4O75096 1905 aa2.34□□□□□ -2.04
RNU6-28P-201ENST00000362378 TET2Q6N021 2002 aaPredicted RBP2.34□□□□□ -2.04
RNU6-28P-201ENST00000362378 NOTCH2Q04721 2471 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 IGLV3-16A0A075B6K0 115 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 IGKV1-8A0A0C4DH67 115 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 ANKRD63C9JTQ0 380 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 NVLO15381 856 aaKnown RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 MPDU1O75352 247 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 YIF1AO95070 293 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 GABRG2P18507 467 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 PMCHP20382 165 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 DTYMKP23919 212 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 GABRR2P28476 465 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 RBM34P42696 430 aaKnown RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 PPICP45877 212 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 PPOXP50336 477 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 PSMD4P55036 377 aaKnown RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 UCNP55089 124 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 CLDN6P56747 220 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 ATP6V0D1P61421 351 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 YWHAEP62258 255 aaKnown RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 LOXL1Q08397 574 aaPredicted RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLC39A6Q13433 755 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 TFDP2Q14188 446 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZNF266Q14584 549 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 TCEAL5Q5H9L2 206 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 ZFP2Q6ZN57 461 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 CDKL3Q8IVW4 592 aaPredicted RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 KIF2BQ8N4N8 673 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 CYB561D1Q8N8Q1 229 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 FBXO36Q8NEA4 188 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 MITD1Q8WV92 249 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 TCEAL3Q969E4 200 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 PTX4Q96A99 478 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 SGTBQ96EQ0 304 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 DYNLL2Q96FJ2 89 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 CAMK2N2Q96S95 79 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 UQCC2Q9BRT2 126 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLIRPQ9GZT3 109 aaKnown RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 NAA50Q9GZZ1 169 aaKnown RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 DDX19AQ9NUU7 478 aaKnown RBP2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 PIKFYVEQ9Y2I7 2098 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 MROH7Q68CQ1 1323 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 PCDH11XQ9BZA7 1347 aa2.33□□□□□ -2.04
RNU6-28P-201ENST00000362378 A0A1W2PP18 115 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 H3BN98 237 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 BOLA2-SMG1P6H3BVE0 249 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 SOCS1O15524 211 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 NMT2O60551 498 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLC16A7O60669 478 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 TGM6O95932 706 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 MBP02144 154 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 CATP04040 527 aaKnown RBP2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 GLAP06280 429 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 KLK1P06870 262 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 STAG3L2P0CL84 134 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 IGFBP3P17936 291 aaPredicted RBP2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 PSMC3P17980 439 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 MYCNOSP40205 109 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 CSKP41240 450 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 RPS9P46781 194 aaKnown RBP2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 RAB7AP51149 207 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 CCNG1P51959 295 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 CDKN2DP55273 166 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 CARD18P57730 90 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 SYCNQ0VAF6 134 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 TSC22D1Q15714 1073 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 PRMT9Q6P2P2 845 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 ASCL4Q6XD76 172 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 Q6ZR03 302 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 SLC35D2Q76EJ3 337 aa2.32□□□□□ -2.04
RNU6-28P-201ENST00000362378 OR2W3Q7Z3T1 314 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms