RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CD99P14209 185 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 PMCHP20382 165 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 CSNK1EP49674 416 aaKnown RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 MELKQ14680 651 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 TIGITQ495A1 244 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 S100A7AQ86SG5 101 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 GPR137CQ8N3F9 429 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ZDHHC22Q8N966 263 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SPTSSAQ969W0 71 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ACTR3CQ9C0K3 210 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 UCK1Q9HA47 277 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM9BQ9NQ34 198 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 CACFD1Q9UGQ2 172 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 NTNG1Q9Y2I2 539 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 TANC2Q9HCD6 1990 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 GP1BAP07359 652 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 TRHRP34981 398 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CLEC1AQ8NC01 280 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ISOC2Q96AB3 205 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF2Q9BSG1 426 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 SLC17A9Q9BYT1 436 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 AMDHD2Q9Y303 409 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 A6NDN8 102 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 SULT2B1O00204 365 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 MEP1BQ16820 701 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 FAM110CQ1W6H9 321 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 TEAD3Q99594 435 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 VSTM2BA6NLU5 285 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ADAP1O75689 374 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 DOC2BQ14184 412 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 UBE2V2Q15819 145 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM225Q6GV28 225 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 FIBINQ8TAL6 211 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 IL22RA2Q969J5 263 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 STARD4Q96DR4 205 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 SEMA6CQ9H3T2 930 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 USP2O75604 605 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ABHD16AO95870 558 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 GPANK1O95872 356 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 SURF2Q15527 256 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 INPP5JQ15735 1006 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 DCAF12L2Q5VW00 463 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CYB5R2Q6BCY4 276 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ARSGQ96EG1 525 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 WASHC3Q9Y3C0 194 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 A0A1B0GTQ1 180 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 C8AP07357 584 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 IQCF3P0C7M6 154 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CD96P40200 585 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 HABP2Q14520 560 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 TGIF2LXQ8IUE1 241 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CMBLQ96DG6 245 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 GHITMQ9H3K2 345 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 NOSIPQ9Y314 301 aaKnown RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 LRRC37A3O60309 1634 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 KIAA1549Q9HCM3 1950 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 RBFOX3A6NFN3 312 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 K7ERU9 68 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 BCL6P41182 706 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 BTNL8Q6UX41 500 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 OR51F2Q8NH61 342 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CAPNS2Q96L46 248 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 PLAC1Q9HBJ0 212 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CD14P08571 375 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 NDUFB7P17568 137 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CSNK1DP48730 415 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 HSF1Q00613 529 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 RPL7L1Q6DKI1 246 aaKnown RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 TMPPEQ6ZT21 453 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ACOT4Q8N9L9 421 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 HIST1H2BAQ96A08 127 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 IGKV6D-21A0A0A0MT36 114 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 DUXBA0A1W2PPF3 345 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 POU3F2P20265 443 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 TBXA2RP21731 343 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 RTP3Q9BQQ7 232 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 VN1R3Q9BXE9 311 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 PCED1AQ9H1Q7 454 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 LEFTY2O00292 366 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 LANCL1O43813 399 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CRHP06850 196 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 PTHLHP12272 177 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 PRPH2P23942 346 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 TAS2R60P59551 318 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 NKAIN2Q5VXU1 208 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 RGS7BPQ6MZT1 257 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-203ENST00000358544 FBLIM1Q8WUP2 373 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ARHGDIGQ99819 225 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 MACROD1Q9BQ69 325 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 MS4A8Q9BY19 250 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 BARHL1Q9BZE3 327 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 BANF2Q9H503 90 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 CLCF1Q9UBD9 225 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 ATRQ13535 2644 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 FPR2P25090 351 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 SLC6A8P48029 635 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM268Q5VZI3 342 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 OR52R1Q8NGF1 315 aa5.53□□□□□ -1.52
VPS13B-203ENST00000358544 LMX1AQ8TE12 382 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms