RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 YIPF5Q969M3 257 aa15.08■□□□□ 0.01
VPS13B-201ENST00000355155 RFT1Q96AA3 541 aa15.08■□□□□ 0.01
VPS13B-201ENST00000355155 NUDT16L1Q9BRJ7 211 aaKnown RBP15.08■□□□□ 0.01
VPS13B-201ENST00000355155 C11orf54Q9H0W9 315 aaPredicted RBP15.08■□□□□ 0.01
VPS13B-201ENST00000355155 METTL17Q9H7H0 456 aaPredicted RBP15.08■□□□□ 0.01
VPS13B-201ENST00000355155 EIF2S3P41091 472 aaKnown RBP15.08■□□□□ 0
VPS13B-201ENST00000355155 PTH2RP49190 550 aa15.08■□□□□ 0
VPS13B-201ENST00000355155 TUSC5Q8IXB3 177 aa15.08■□□□□ 0
VPS13B-201ENST00000355155 OR52H1Q8NGJ2 320 aa15.08■□□□□ 0
VPS13B-201ENST00000355155 OR1F12Q8NHA8 337 aa15.08■□□□□ 0
VPS13B-201ENST00000355155 THAP7Q9BT49 309 aaPredicted RBP15.08■□□□□ 0
VPS13B-201ENST00000355155 OR2H1Q9GZK4 316 aa15.08■□□□□ 0
VPS13B-201ENST00000355155 WNT5BQ9H1J7 359 aa15.08■□□□□ 0
VPS13B-201ENST00000355155 RBFOX1Q9NWB1 397 aaKnown RBP15.08■□□□□ 0
VPS13B-201ENST00000355155 DKK4Q9UBT3 224 aa15.08■□□□□ 0
VPS13B-201ENST00000355155 ALPK2Q86TB3 2170 aa15.08■□□□□ 0
VPS13B-201ENST00000355155 SGCEO43556 437 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 BDKRB2P30411 391 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 THBS4P35443 961 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 SLC36A2Q495M3 483 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 OR1M1Q8NGA1 313 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 OR5D14Q8NGL3 314 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 ADAT3Q96EY9 351 aaPredicted RBP15.07■□□□□ 0
VPS13B-201ENST00000355155 S100A16Q96FQ6 103 aaKnown RBP15.07■□□□□ 0
VPS13B-201ENST00000355155 LYZL4Q96KX0 146 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 TMEM138Q9NPI0 162 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 GTF2A1LQ9UNN4 478 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 XRCC3O43542 346 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 ERCC1P07992 297 aaPredicted RBP15.07■□□□□ 0
VPS13B-201ENST00000355155 ODF4Q2M2E3 257 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 Q6ZS92 163 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 ZNF100Q8IYN0 542 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 ZNF283Q8N7M2 679 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 C19orf18Q8NEA5 215 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 FNDC9Q8TBE3 224 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 SYNPRQ8TBG9 265 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 SLC7A10Q9NS82 523 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 RHBDL2Q9NX52 303 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 ZNF224Q9NZL3 707 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 CIB4A0PJX0 185 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 GABARAPH6UMI1 98 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 PRF1P14222 555 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 DYRK1AQ13627 763 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 NRARPQ7Z6K4 114 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 DNAAF1Q8NEP3 725 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 OR51E1Q8TCB6 317 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 FAM3DQ96BQ1 224 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 GMPPAQ96IJ6 420 aaPredicted RBP15.07■□□□□ 0
VPS13B-201ENST00000355155 MALT1Q9UDY8 824 aa15.07■□□□□ 0
VPS13B-201ENST00000355155 NCOA6Q14686 2063 aaPredicted RBP15.06■□□□□ 0
VPS13B-201ENST00000355155 M0R135 149 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 ZNF24P17028 368 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 HTR2CP28335 458 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 MAP2K3P46734 347 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 MZT2BQ6NZ67 158 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 COLCA1Q6ZS62 124 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 ABHD12BQ7Z5M8 362 aaPredicted RBP15.06■□□□□ 0
VPS13B-201ENST00000355155 FGGYQ96C11 551 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 ZNF799Q96GE5 643 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 SORCS2Q96PQ0 1159 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 ALKBH3Q96Q83 286 aaPredicted RBP15.06■□□□□ 0
VPS13B-201ENST00000355155 NEURL2Q9BR09 285 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 DEFB127Q9H1M4 99 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 RGCCQ9H4X1 137 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 GPR84Q9NQS5 396 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 SLC5A6Q9Y289 635 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 KNTC1P50748 2209 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 LMX1BO60663 402 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 ADRB1P08588 477 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 AGTR1P30556 359 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 ALDH3B1P43353 468 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 QRFPP83859 136 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 PSG4Q00888 419 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 SRYQ05066 204 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 SKA3Q8IX90 412 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 CADM3Q8N126 398 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 OR5AS1Q8N127 324 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 ZADH2Q8N4Q0 377 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 LDAHQ9H6V9 325 aa15.06■□□□□ 0
VPS13B-201ENST00000355155 ARHGAP21Q5T5U3 1957 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 ZNF292O60281 2723 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 AHCTF1Q8WYP5 2266 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 OR14I1A6ND48 311 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 ZNF587BE7ETH6 402 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 E9PLN8 166 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 DHRS3O75911 302 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 CNOT4O95628 575 aaKnown RBP15.05■□□□□ 0
VPS13B-201ENST00000355155 ZNF32P17041 273 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 OR3A2P47893 321 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 PRKXP51817 358 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 TPTEP56180 551 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 SSBP1Q04837 148 aaKnown RBP15.05■□□□□ 0
VPS13B-201ENST00000355155 ZNF169Q14929 603 aaPredicted RBP15.05■□□□□ 0
VPS13B-201ENST00000355155 C2orf76Q3KRA6 126 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 ZNF554Q86TJ5 538 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 HTRA1Q92743 480 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 SPSB4Q96A44 273 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 APH1AQ96BI3 265 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 KLK13Q9UKR3 277 aa15.05■□□□□ 0
VPS13B-201ENST00000355155 TFECO14948 347 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms