RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 MAP3K19Q56UN5 1328 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 A0A1B0GVI7 797 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 A0A1W2PPR1 153 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 KRTAP16-1A8MUX0 517 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 FAM72CH0Y354 149 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 RCBTB2O95199 551 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SMC2O95347 1197 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 AIFM1O95831 613 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 HBE1P02100 147 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PLEKP08567 350 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PGAM2P15259 253 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 HTR2CP28335 458 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 IL12AP29459 219 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 MAGEA6P43360 314 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 KIR2DS2P43631 304 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 GPR6P46095 362 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SLC25A1P53007 311 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CSNK1G2P78368 415 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF92Q03936 586 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 GNMTQ14749 295 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SHHQ15465 462 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 C18orf21Q32NC0 220 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 C1orf100Q5SVJ3 147 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 FAM72AQ5TYM5 149 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 FAM72DQ6L9T8 149 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CD300LGQ6UXG3 332 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ARCQ7LC44 396 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 HDDC2Q7Z4H3 204 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CYP4Z1Q86W10 505 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 FAM72BQ86X60 149 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 KLHL30-AS1Q8NEE0 82 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 OR2AP1Q8NGE2 309 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 TYMSOSQ8TAI1 123 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 OR51E1Q8TCB6 317 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC12Q8WUD4 166 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SDR42E1Q8WUS8 393 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF488Q96MN9 340 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ATOH8Q96SQ7 321 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC94Q9BW85 323 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 GOLPH3Q9H4A6 298 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CSNK1G1Q9HCP0 422 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 NUDT15Q9NV35 164 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CLN6Q9NWW5 311 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC59Q9P031 241 aaKnown RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 IFNKQ9P0W0 207 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 DCDC2Q9UHG0 476 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 LGALS13Q9UHV8 139 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 VPS13DQ5THJ4 4388 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 VWFP04275 2813 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 A0A0J9YYE9 177 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ERICH2A1L162 156 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 VPS37CA5D8V6 355 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 FAM166BA8MTA8 275 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 XRCC2O43543 280 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 RDH16O75452 317 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 IGHV3-48P01763 117 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 TRBC1P01850 177 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 GP1BAP07359 652 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PGA4P0DJD7 388 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PGA3P0DJD8 388 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PGA5P0DJD9 388 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CD37P11049 281 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 LIPCP11150 499 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 TCN1P20061 433 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 GPX4P36969 197 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 FGF8P55075 233 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 RPL32P62910 135 aaKnown RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC63Q05C16 580 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 MAD2L1BPQ15013 274 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ANGPT1Q15389 498 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SYCP1Q15431 976 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 TIMM50Q3ZCQ8 353 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ERICH5Q6P6B1 374 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF600Q6ZNG1 722 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 STXBP4Q6ZWJ1 553 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CDC20BQ86Y33 519 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SLC34A3Q8N130 599 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 JAGN1Q8N5M9 183 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM252Q8N6L7 170 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CDRT4Q8N9R6 151 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF740Q8NDX6 193 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 OR10R2Q8NGX6 335 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PDCD6IPQ8WUM4 868 aaKnown RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC29Q8WV35 223 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 FGF14Q92915 247 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SERPINB12Q96P63 405 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SH3GL1Q99961 368 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 KCNS3Q9BQ31 491 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 APOL2Q9BQE5 337 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 OSBPL10Q9BXB5 764 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SIRT7Q9NRC8 400 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CCL28Q9NRJ3 127 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM100Q9NV29 134 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ABCD2Q9UBJ2 740 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 GMEB1Q9Y692 573 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 V9GYY9 64 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CASP8AP2Q9UKL3 1982 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 COL4A1P02462 1669 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 A0A087WWV3 80 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 A0A0J9YXY3 114 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms