RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TMEM200AQ86VY9 491 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 BAP18Q8IXM2 172 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 LGI3Q8N145 548 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 S100PBPQ96BU1 408 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 MAP6Q96JE9 813 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 OXGR1Q96P68 337 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CNTNAP3Q9BZ76 1288 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 NMNAT2Q9BZQ4 307 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 SLC25A31Q9H0C2 315 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 OR4C45A6NMZ5 311 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 LANCL1O43813 399 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 GPR137BO60478 399 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CNR1P21554 472 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 RBP2P50120 134 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 SUMO3P55854 103 aaPredicted RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 TAGLNQ01995 201 aaKnown RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 WDR5BQ86VZ2 330 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CLEC1AQ8NC01 280 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CCDC86Q9H6F5 360 aaKnown RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 CSAG2Q9Y5P2 127 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 A6NCN8 305 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 RAC2P15153 192 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 FOLR1P15328 257 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 GNB3P16520 340 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 RPL23AP62750 156 aaKnown RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 CLINT1Q14677 625 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 TMEM71Q6P5X7 295 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 LINC00696Q6ZRV3 163 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 EXD3Q8N9H8 876 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 FBXO4Q9UKT5 387 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 PHF1O43189 567 aaPredicted RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 CXCL13O43927 109 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 PTP4A3O75365 173 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 ATG12O94817 140 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 TBPP20226 339 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 GPR3P46089 330 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CYB561P49447 251 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 ATG4DQ86TL0 474 aaPredicted RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 OR10AC1Q8NH08 325 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 TERB2Q8NHR7 220 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 SARGQ9BW04 601 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CALHM2Q9HA72 323 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 TNFSF12O43508 249 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CTAG2O75638 210 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CT45A8P0DMV1 189 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CT45A9P0DMV2 189 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 ABOP16442 354 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 FUT7Q11130 342 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 BAMBIQ13145 260 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 ISXQ2M1V0 245 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CT45A2Q5DJT8 189 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 ELFN2Q5R3F8 820 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 DEGS2Q6QHC5 323 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 MUC20Q8N307 709 aaPredicted RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 ST8SIA2Q92186 375 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 SPACA9Q96E40 222 aaPredicted RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 LRFN1Q9P244 771 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 DTX4Q9Y2E6 619 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 ICE1Q9Y2F5 2266 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 ST8SIA3O43173 380 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 IGHEP01854 428 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 GSTP1P09211 210 aaKnown RBP6.46□□□□□ -1.37
VCAN-202ENST00000342785 OR5H8P0DN80 308 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 IL32P24001 234 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 ETFDHQ16134 617 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 GALNT16Q8N428 558 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 FAM213BQ8TBF2 198 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 UTP23Q9BRU9 249 aaKnown RBP6.46□□□□□ -1.37
VCAN-202ENST00000342785 ZNF629Q9UEG4 869 aaPredicted RBP6.46□□□□□ -1.37
VCAN-202ENST00000342785 C4orf51C9J302 202 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 HSPB6O14558 160 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 MGMTP16455 207 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 IL2RGP31785 369 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 EPHA4P54764 986 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 ARG2P78540 354 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 SHBQ15464 509 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 STK11Q15831 433 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 OR52W1Q6IF63 320 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 LYG2Q86SG7 212 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 TDHQ8IZJ6 230 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 SUMF2Q8NBJ7 301 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 OR5L1Q8NGL2 311 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 OR1J2Q8NGS2 313 aa6.46□□□□□ -1.37
VCAN-202ENST00000342785 EMG1Q92979 244 aaKnown RBP6.46□□□□□ -1.37
VCAN-202ENST00000342785 ZNF2Q9BSG1 426 aaPredicted RBP6.46□□□□□ -1.37
VCAN-202ENST00000342785 ZNF814B7Z6K7 855 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 S100PP25815 95 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 CDAP32320 146 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 ACAA2P42765 397 aaKnown RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 ZNF133P52736 654 aaPredicted RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 UBE2IP63279 158 aaKnown RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 MYBPHQ13203 477 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SOHLH1Q5JUK2 328 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SUMF1Q8NBK3 374 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 BHLHE23Q8NDY6 225 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 OR5T1Q8NG75 326 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 LRRC46Q96FV0 321 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 KCNJ15Q99712 375 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 ZNF416Q9BWM5 594 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms