RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 GABARAPH6UMI1 98 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 PSMA6P60900 246 aaKnown RBP13.61□□□□□ -0.23
MBD1-203ENST00000339998 EGFL6Q8IUX8 553 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 FGFBP3Q8TAT2 258 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 ADGRG7Q96K78 797 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 B3GNT4Q9C0J1 378 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 OR10A4Q9H209 315 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 DPAGT1Q9H3H5 408 aa13.61□□□□□ -0.23
MBD1-203ENST00000339998 LOC100289279A0A1B0GTE1 492 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 CIB4A0PJX0 185 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 GGT3PA6NGU5 568 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 FTH1P19P0C7X4 201 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 UBCP0CG48 685 aaKnown RBP13.6□□□□□ -0.23
MBD1-203ENST00000339998 MSR1P21757 451 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 GFRA1P56159 465 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 GLT8D1Q68CQ7 371 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 RAB40AQ8WXH6 277 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 PRR14LQ5THK1 2151 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 A0A1W2PP11 408 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 C21orf140B9A014 251 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 FKBP2P26885 142 aaKnown RBP13.6□□□□□ -0.23
MBD1-203ENST00000339998 GUCA1AP43080 201 aaPredicted RBP13.6□□□□□ -0.23
MBD1-203ENST00000339998 FCN2Q15485 313 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 ZFP69Q49AA0 526 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 ANKRD16Q6P6B7 361 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 ZNF813Q6ZN06 617 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 OR5D18Q8NGL1 313 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 OR2V1Q8NHB1 315 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 NELFAQ9H3P2 528 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 PLEK2Q9NYT0 353 aa13.6□□□□□ -0.23
MBD1-203ENST00000339998 CENPXA8MT69 81 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 NKX2-8O15522 239 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 XRCC3O43542 346 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 GSTZ1O43708 216 aaPredicted RBP13.59□□□□□ -0.23
MBD1-203ENST00000339998 ATP6V1G1O75348 118 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 SF3B4Q15427 424 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■■ 30.7
MBD1-203ENST00000339998 CREB3L1Q96BA8 519 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 TTTY12Q9BZ98 90 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 ZNF703Q9H7S9 590 aaPredicted RBP13.59□□□□□ -0.23
MBD1-203ENST00000339998 NPAP1Q9NZP6 1156 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 ETV7Q9Y603 341 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 A0A1B0GVI7 797 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 WIPF3A6NGB9 483 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 WISP2O76076 250 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 VAMP5O95183 116 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 CXCL3P19876 107 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 FOXG1P55316 489 aaPredicted RBP13.59□□□□□ -0.23
MBD1-203ENST00000339998 CCDC92Q53HC0 331 aaPredicted RBP13.59□□□□□ -0.23
MBD1-203ENST00000339998 OR2AE1Q8NHA4 323 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 AKR7LQ8NHP1 331 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 LYZL4Q96KX0 146 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 RHBDD3Q9Y3P4 386 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 CTDSPLO15194 276 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 HPXP02790 462 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 WT1P19544 449 aaPredicted RBP13.59□□□□□ -0.23
MBD1-203ENST00000339998 IFITM2Q01629 132 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 EIF3IQ13347 325 aaKnown RBP13.59□□□□□ -0.23
MBD1-203ENST00000339998 PCGF3Q3KNV8 242 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 AAED1Q7RTV5 226 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 LIPGQ9Y5X9 500 aa13.59□□□□□ -0.23
MBD1-203ENST00000339998 VEGFCP49767 419 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 HGFACQ04756 655 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 LINC00303Q3SY05 128 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 ZNF774Q6NX45 483 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 TMEM251Q8N6I4 163 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 CLEC1AQ8NC01 280 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 OR1M1Q8NGA1 313 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 ZNF486Q96H40 463 aaPredicted RBP13.58□□□□□ -0.24
MBD1-203ENST00000339998 FSTP19883 344 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 HLA-DMAP28067 261 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 BDKRB2P30411 391 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 RRAS2P62070 204 aaPredicted RBP13.58□□□□□ -0.24
MBD1-203ENST00000339998 POU4F3Q15319 338 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 SNAI3Q3KNW1 292 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 C10orf128Q5T292 105 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 HDDC2Q7Z4H3 204 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 LYPD6Q86Y78 171 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 C20orf196Q8IYI0 205 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 PAQR4Q8N4S7 273 aaPredicted RBP13.58□□□□□ -0.24
MBD1-203ENST00000339998 FNDC9Q8TBE3 224 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 GIMAP1Q8WWP7 306 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 PGAM5Q96HS1 289 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 CMTM3Q96MX0 182 aa13.58□□□□□ -0.24
MBD1-203ENST00000339998 PAQR5Q9NXK6 330 aaPredicted RBP13.58□□□□□ -0.24
MBD1-203ENST00000339998 TMEM235A6NFC5 223 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 GJE1A6NN92 205 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 PMP22Q01453 160 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 PLGLB1Q02325 96 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 UNC119Q13432 240 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 ST3GAL2Q16842 350 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 CEACAM16Q2WEN9 425 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 SLC22A6Q4U2R8 563 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 PIP4P1Q86T03 277 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 PHF21AQ96BD5 680 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 FAM173AQ9BQD7 235 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 DEFB127Q9H1M4 99 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 BOKQ9UMX3 212 aaPredicted RBP13.57□□□□□ -0.24
MBD1-203ENST00000339998 PCDHGA1Q9Y5H4 931 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms