RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 PPP1R3CQ9UQK1 317 aa7.9□□□□□ -1.14
RTN3-202ENST00000339997 ABCA4P78363 2273 aa7.9□□□□□ -1.14
RTN3-202ENST00000339997 TMEM200CA6NKL6 621 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 ZNF891A8MT65 544 aaPredicted RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 ENSAO43768 121 aaKnown RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 DNAJB6O75190 326 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 TPOP07202 933 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 NFYBP25208 207 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 GCH1P30793 250 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 TSFMP43897 325 aaKnown RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 RAB38P57729 211 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 AGBL4Q5VU57 503 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 DHRS4L2Q6PKH6 230 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 LGI3Q8N145 548 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 FAM58AQ8N1B3 248 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 C19orf47Q8N9M1 422 aaKnown RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 OR4D9Q8NGE8 314 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 CABLES2Q9BTV7 478 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 LANCL2Q9NS86 450 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 RNF150Q9ULK6 438 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 B3GALT5Q9Y2C3 310 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 RIF1Q5UIP0 2472 aaKnown RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 TRAV36DV7A0A075B6V5 113 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 AQP8O94778 261 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 OR2F2O95006 317 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 F12P00748 615 aaPredicted RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 ARG1P05089 322 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 NAGAP17050 411 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 POU3F3P20264 500 aaPredicted RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 EMDP50402 254 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 GRB2P62993 217 aaKnown RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 ACVR1Q04771 509 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 SRSF5Q13243 272 aaKnown RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 ZNF684Q5T5D7 378 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 TMEM104Q8NE00 496 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 BPIFCQ8NFQ6 507 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 OR13C8Q8NGS7 320 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 TRAF4Q9BUZ4 470 aaPredicted RBP7.9□□□□□ -1.15
RTN3-202ENST00000339997 GPR84Q9NQS5 396 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 POMT2Q9UKY4 750 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 PADI1Q9ULC6 663 aa7.9□□□□□ -1.15
RTN3-202ENST00000339997 A0A096LPE4 126 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 A0A1W2PPZ6 126 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 TMEM189-UBE2V1I3L0A0 370 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 LIMS3P0CW19 117 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 LIMS4P0CW20 117 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 SELENOPP49908 381 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 SLC37A1P57057 533 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 PCBP4P57723 403 aaKnown RBP7.89□□□□□ -1.15
RTN3-202ENST00000339997 FABP9Q0Z7S8 132 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 KIRREL2Q6UWL6 708 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 OVCH1Q7RTY7 1134 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 UBE3DQ7Z6J8 389 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 LSRQ86X29 649 aaPredicted RBP7.89□□□□□ -1.15
RTN3-202ENST00000339997 ANKRD53Q8N9V6 530 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 DCBLD2Q96PD2 775 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 RHOFQ9HBH0 211 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 IL23AQ9NPF7 189 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 FBXO34Q9NWN3 711 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 ADAM29Q9UKF5 820 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 CACNA1HO95180 2353 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 LOC102724200A0A096LPH7 203 aaPredicted RBP7.89□□□□□ -1.15
RTN3-202ENST00000339997 GALR3O60755 368 aaPredicted RBP7.89□□□□□ -1.15
RTN3-202ENST00000339997 ZFAND5O76080 213 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 ST6GAL1P15907 406 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 CDAP32320 146 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 DIO1P49895 249 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 NCMAPQ5T1S8 102 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 KIAA0895LQ68EN5 471 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 RPUSD3Q6P087 351 aaKnown RBP7.89□□□□□ -1.15
RTN3-202ENST00000339997 SYT13Q7L8C5 426 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 MUC20Q8N307 709 aaPredicted RBP7.89□□□□□ -1.15
RTN3-202ENST00000339997 TIMM29Q9BSF4 260 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 NSG1A0A0A6YYJ2 146 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 KIR2DS5A0A0G2JLQ3 304 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 A0A0G2JNG1 304 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 KIR2DS3K7RE56 304 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 SCRG1O75711 98 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 MT-ND4LP03901 98 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 HLA-DOBP13765 273 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 ZNF266Q14584 549 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 KIR2DS5Q14953 304 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 METRNLQ641Q3 311 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 LINC00299Q6ZSB3 139 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 MOB1BQ7L9L4 216 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 OR4F5Q8NH21 305 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 SEH1LQ96EE3 360 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 OR4F4Q96R69 305 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 OR6C1Q96RD1 312 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 PDFQ9HBH1 243 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 LAMP3Q9UQV4 416 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 SIGLEC6O43699 453 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 NXPH2O95156 264 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 ZFPL1O95159 310 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 SLC35E2P0CK97 266 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 FCER1GP30273 86 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 BSGP35613 385 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.89□□□□□ -1.155e-6■■■□□ 15.4
RTN3-202ENST00000339997 TMEM201Q5SNT2 666 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 RBMS3Q6XE24 437 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms