RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ALG12Q9BV10 488 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RAB11FIP5Q9BXF6 653 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 NOX4Q9NPH5 578 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 LHX6Q9UPM6 363 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 YARS2Q9Y2Z4 477 aaKnown RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PTGDR2Q9Y5Y4 395 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 M0R1X1 148 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 NFKBIEO00221 500 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PIRO00625 290 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 IL18BPO95998 194 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TACSTD2P09758 323 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ARAFP10398 606 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PF4V1P10720 104 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PTGER3P43115 390 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 GYG1P46976 350 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM33P57088 247 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 S100A10P60903 97 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RHOGP84095 191 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 LRRC10Q5BKY1 277 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 CEACAM20Q6UY09 585 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 Q6ZN92 141 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 MEPCEQ7L2J0 689 aaKnown RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF584Q8IVC4 421 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 OR4C16Q8NGL9 310 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 OR1L6Q8NGR2 347 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 OR5AK3PQ8NH89 298 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 SLAMF6Q96DU3 332 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 LIN37Q96GY3 246 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 C4orf36Q96KX1 117 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PRRC1Q96M27 445 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 NSUN5Q96P11 429 aaKnown RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ABHD6Q9BV23 337 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 MEGF9Q9H1U4 602 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 VCX2Q9H322 139 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZDHHC6Q9H6R6 413 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 MTHFD2LQ9H903 347 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 FBRSQ9HAH7 460 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 CYTL1Q9NRR1 136 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 GALPQ9UBC7 116 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 YBX2Q9Y2T7 364 aaKnown RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM150BA6NC51 233 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF860A6NHJ4 632 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RIIAD1A6NNX1 92 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 FGF17O60258 216 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 CYB5AP00167 134 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 C1QCP02747 245 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 DANCRP0C864 163 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ADRA1AP35348 466 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RBMXP38159 391 aaKnown RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 LPAR6P43657 344 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 CKS1BP61024 79 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 SSBP2P81877 361 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ACVR1Q04771 509 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 FZD2Q14332 565 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ATXN7L2Q5T6C5 722 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PAQR6Q6TCH4 344 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 POC1AQ8NBT0 407 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 CMTM2Q8TAZ6 248 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RAX2Q96IS3 184 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 CLUHP3Q96NS8 147 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RAB22AQ9UL26 194 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 WDR45Q9Y484 360 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TRAV9-1A0A075B6T8 112 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 A0A1W2PRS3 328 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RBFOX3A6NFN3 312 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 SCDO00767 359 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PDE6DO43924 150 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 LRP3O75074 770 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RCBTB2O95199 551 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TIAF1O95411 115 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PGA4P0DJD7 388 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PGA5P0DJD9 388 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TFPIP10646 304 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 CCL2P13500 99 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 SRSF3P84103 164 aaKnown RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PLPPR5Q32ZL2 321 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TKFCQ3LXA3 575 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 CARD17Q5XLA6 110 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF66Q6ZN08 573 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM150AQ86TG1 271 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 SLC25A42Q86VD7 318 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TUSC5Q8IXB3 177 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF101Q8IZC7 436 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM130Q8N3G9 435 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 OR2T33Q8NG76 320 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 OR13C9Q8NGT0 318 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TSLPQ969D9 159 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 HHIPL1Q96JK4 782 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PRAP1Q96NZ9 151 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 DEFB129Q9H1M3 183 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZDHHC11Q9H8X9 412 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF219Q9P2Y4 722 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 MSRAQ9UJ68 235 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 RNF150Q9ULK6 438 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 POLR3KQ9Y2Y1 108 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TBL2Q9Y4P3 447 aaKnown RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PAPPAQ13219 1627 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF736B4DX44 427 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-201ENST00000338963 C22orf46C9J442 243 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PPP1R11O60927 126 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms