RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ZNF735P0CB33 412 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 HRH1P35367 487 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 OR3A4PP47883 348 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 ZNF121P58317 390 aaPredicted RBP13.17□□□□□ -0.3
UBA1-201ENST00000335972 ACY1Q03154 408 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 TOMM20Q15388 145 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 TMEM81Q6P7N7 255 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 ZNF813Q6ZN06 617 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 RABEPKQ7Z6M1 372 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 ST8SIA4Q92187 359 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
UBA1-201ENST00000335972 GPR84Q9NQS5 396 aa13.17□□□□□ -0.3
UBA1-201ENST00000335972 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
UBA1-201ENST00000335972 ZNF20P17024 532 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 DHRS2Q13268 280 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 PPP1R3BQ86XI6 285 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 ADAD2Q8NCV1 583 aaKnown RBP13.16□□□□□ -0.3
UBA1-201ENST00000335972 NAXEQ8NCW5 288 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 OR10K1Q8NGX5 313 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 OR2AJ1Q8NGZ0 328 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 POTEKPQ9BYX7 375 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 CHRDQ9H2X0 955 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 A0A1B0GTQ1 180 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 HSPB2A8KAH6 182 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 ITGB2P05107 769 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 CLDN17P56750 224 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 HSPB2Q16082 182 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 MISPQ8IVT2 679 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 WDSUB1Q8N9V3 476 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 TMEM41AQ96HV5 264 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 LINC00052Q96N35 136 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 TGIF2Q9GZN2 237 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 ADAMTS9Q9P2N4 1935 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 LDLRAD4O15165 306 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 RP2O75695 350 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 F10P00742 488 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 CCL4P13236 92 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 GABRA1P14867 456 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 EPHA8P29322 1005 aaPredicted RBP13.16□□□□□ -0.3
UBA1-201ENST00000335972 CD96P40200 585 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 HLA-BQ31612 363 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 Q7L0L9 218 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 DTX1Q86Y01 620 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 ZNF283Q8N7M2 679 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 OR8B12Q8NGG6 310 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 CST11Q9H112 138 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
UBA1-201ENST00000335972 F5H5K5 113 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 SOCS1O15524 211 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 WDPCPO95876 746 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 RLN2P04090 185 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 HCKP08631 526 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 UBCP0CG48 685 aaKnown RBP13.15□□□□□ -0.3
UBA1-201ENST00000335972 RRASP10301 218 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 ZNF43P17038 809 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 FSTP19883 344 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.3
UBA1-201ENST00000335972 STARD6P59095 220 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 ZP4Q12836 540 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 RNASE10Q5GAN6 216 aaKnown RBP13.15□□□□□ -0.3
UBA1-201ENST00000335972 NHLRC3Q5JS37 347 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 LYSMD4Q5XG99 296 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 TMEM65Q6PI78 240 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 GLIPR1L1Q6UWM5 242 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 KMT5CQ86Y97 462 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 BEST3Q8N1M1 668 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 NUBPLQ8TB37 319 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 UCN2Q96RP3 112 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 GPER1Q99527 375 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 B3GALT5Q9Y2C3 310 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 TRAV14DV4A0A0A6YYC5 116 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 SULT2B1O00204 365 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 NUPL2O15504 423 aaKnown RBP13.15□□□□□ -0.3
UBA1-201ENST00000335972 ZNHIT1O43257 154 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 TRAF3IP2O43734 574 aaPredicted RBP13.15□□□□□ -0.3
UBA1-201ENST00000335972 PPP1R1AQ13522 171 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 GSG1LQ6UXU4 331 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 TMEM229BQ8NBD8 167 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 OR2M3Q8NG83 312 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 KCNK7Q9Y2U2 307 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 RHBDD3Q9Y3P4 386 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 EEF1E1-BLOC1S5C9J1V9 151 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 IGHG1P01857 330 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 CD34P28906 385 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 SLC6A9P48067 706 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 MMP16P51512 607 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 LPAL2Q16609 132 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.15□□□□□ -0.3
UBA1-201ENST00000335972 OR5L2Q8NGL0 311 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 RBPMSQ93062 196 aaKnown RBP13.15□□□□□ -0.3
UBA1-201ENST00000335972 MRGPRFQ96AM1 343 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 RADILQ96JH8 1075 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 MRPL13Q9BYD1 178 aaKnown RBP13.15□□□□□ -0.3
UBA1-201ENST00000335972 IFT46Q9NQC8 304 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 SIT1Q9Y3P8 196 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 SPEF1Q9Y4P9 236 aa13.15□□□□□ -0.3
UBA1-201ENST00000335972 IGLV3-12A0A075B6K2 115 aa13.14□□□□□ -0.31
UBA1-201ENST00000335972 A0A1B0GTI1 187 aa13.14□□□□□ -0.31
UBA1-201ENST00000335972 MEGF11A6BM72 1044 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms