RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SNRPGP15A8MWD9 76 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 TOX3O15405 576 aaPredicted RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 FURINP09958 794 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 OR4E1P0C645 316 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ALOX5APP20292 161 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ARRB2P32121 409 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ADRA1AP35348 466 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 CDK5Q00535 292 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 PRDX1Q06830 199 aaKnown RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 FXNQ16595 210 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 NCR3LG1Q68D85 454 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 UQCC3Q6UW78 93 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 OR4D10Q8NGI6 311 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 MVB12AQ96EY5 273 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 SMIM7Q9BQ49 75 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 BCO1Q9HAY6 547 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 CYB5R1Q9UHQ9 305 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 KCNG2Q9UJ96 466 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 LOXHD1Q8IVV2 1947 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 SERTM2A0A1B0GWG4 89 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 RNASEK-C17orf49H0YIS7 233 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ADRA2CP18825 462 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 KIR2DL3P43628 341 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 SSR4P51571 173 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ZNF133P52736 654 aaPredicted RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 UBE2G1P62253 170 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 EEF1A2Q05639 463 aaKnown RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 ARL16Q0P5N6 197 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 IL10RAQ13651 578 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ERV3-1Q14264 604 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 TMEM268Q5VZI3 342 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ZNF787Q6DD87 383 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 APOBEC4Q8WW27 367 aaKnown RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 RASD2Q96D21 266 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 LRRC61Q9BV99 259 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 C1QTNF3Q9BXJ4 246 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 CDCA4Q9BXL8 241 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 BANF2Q9H503 90 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ADAM29Q9UKF5 820 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 SPP1P10451 314 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 DTYMKP23919 212 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 IGFBP6P24592 240 aaPredicted RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 MZT1Q08AG7 82 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 VWA2Q5GFL6 755 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 WDR89Q96FK6 387 aaPredicted RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 ARHGDIGQ99819 225 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ACOXLQ9NUZ1 547 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 SSSCA1O60232 199 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 GP1BAP07359 652 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 S100A7P31151 101 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 GGNBP1Q5YKI7 109 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 DHRS4L2Q6PKH6 230 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 CMTM4Q8IZR5 234 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 TMEM99Q8N816 258 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 PIGTQ969N2 578 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 ZNF566Q969W8 418 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 DUS3LQ96G46 650 aaKnown RBP7.45□□□□□ -1.22
VPS41-202ENST00000310301 KCNJ15Q99712 375 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 CTDSP1Q9GZU7 261 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 UBQLN3Q9H347 655 aa7.45□□□□□ -1.22
VPS41-202ENST00000310301 A0A0B4J203 849 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 ZNF264O43296 627 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SMUG1Q53HV7 270 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 ANKRD34AQ69YU3 496 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 TEX101Q9BY14 249 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 UCK1Q9HA47 277 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 KLF13Q9Y2Y9 288 aaPredicted RBP7.44□□□□□ -1.22
VPS41-202ENST00000310301 SLC5A10A0PJK1 596 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 TMEM202A6NGA9 273 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 ENSAO43768 121 aaKnown RBP7.44□□□□□ -1.22
VPS41-202ENST00000310301 MOSPD3O75425 235 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 GLCEO94923 617 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 FABP5Q01469 135 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SLC35D3Q5M8T2 416 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SHISA6Q6ZSJ9 500 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SLC35G3Q8N808 338 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 TMEM105Q8N8V8 129 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 OR4D9Q8NGE8 314 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 PFN4Q8NHR9 129 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 AMDHD1Q96NU7 426 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 GABARAPL1Q9H0R8 117 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 TMEM38AQ9H6F2 299 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 GNG12Q9UBI6 72 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 POMT2Q9UKY4 750 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SCN10AQ9Y5Y9 1956 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 TCAPO15273 167 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 ZNF749O43361 778 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 ZNF92Q03936 586 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 CEBPEQ15744 281 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 C9orf135Q5VTT2 229 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 METRNLQ641Q3 311 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 OR8D4Q8NGM9 314 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 CMBLQ96DG6 245 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SEH1LQ96EE3 360 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 AUNIPQ9H7T9 357 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 TAS2R4Q9NYW5 299 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 H0YIV9 168 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 K7EQM0 130 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 PRAMEF4O60810 478 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 AQP8O94778 261 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms