RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PRSS3P2Q8NHM4 247 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 ARRDC2Q8TBH0 407 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 EDARADDQ8WWZ3 215 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 SLCO4A1Q96BD0 722 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 A4GALTQ9NPC4 353 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 LYRM2Q9NU23 88 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-201ENST00000302528 ASH2LQ9UBL3 628 aa9.47□□□□□ -0.89
CLIP1-201ENST00000302528 CLEC18AA5D8T8 446 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 DRGXA6NNA5 263 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 FZD9O00144 591 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 XRCC2O43543 280 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 NEURL1O76050 574 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 HPP00738 406 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 NRASP01111 189 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 TEAD1P28347 426 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 CLLU1OSQ5K130 101 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 CLEC18CQ8NCF0 446 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 OR4F17Q8NGA8 305 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 GPX8Q8TED1 209 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 WBP2Q969T9 261 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 SLAMF6Q96DU3 332 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 C1QTNF3Q9BXJ4 246 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 SLC46A2Q9BY10 475 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 NRSN2Q9GZP1 204 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 TUBGCP6Q96RT7 1819 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 H0YIV9 168 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 VAMP5O95183 116 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 DUS4LO95620 317 aaKnown RBP9.46□□□□□ -0.89
CLIP1-201ENST00000302528 ZBTB25P24278 435 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 CLN3Q13286 438 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 GGTA1PQ4G0N0 100 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 ACSM6Q6P461 480 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 FBXO46Q6PJ61 603 aaPredicted RBP9.46□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF561Q8N587 486 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 OR1N1Q8NGS0 311 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 SARAFQ96BY9 339 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 DHRS4Q9BTZ2 278 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 MFRPQ9BY79 579 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 CXorf36Q9H7Y0 433 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 USP22Q9UPT9 525 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 C10orf71Q711Q0 1435 aa9.46□□□□□ -0.89
CLIP1-201ENST00000302528 IGHV3-20A0A0C4DH32 117 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 ST8SIA5O15466 376 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 FURINP09958 794 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 IVDP26440 423 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 RPL24P83731 157 aaKnown RBP9.46□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF816Q0VGE8 651 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-201ENST00000302528 COTL1Q14019 142 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 VMA21Q3ZAQ7 101 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 OR52I2Q8NH67 350 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 PFN4Q8NHR9 129 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 ATOH8Q96SQ7 321 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 UBQLN3Q9H347 655 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 SLC5A6Q9Y289 635 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 KIAA1324LA8MWY0 1029 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-201ENST00000302528 M0R082 166 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 FAM87AP0C7U9 286 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 CD40P25942 277 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 GJA4P35212 333 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 POLR2IP36954 125 aaKnown RBP9.46□□□□□ -0.9
CLIP1-201ENST00000302528 DDOSTP39656 456 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 PCBP3P57721 371 aaKnown RBP9.46□□□□□ -0.9
CLIP1-201ENST00000302528 SNRPNP63162 240 aaKnown RBP9.46□□□□□ -0.9
CLIP1-201ENST00000302528 B3GNTL1Q67FW5 361 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-201ENST00000302528 ASTLQ6HA08 431 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-201ENST00000302528 GLIPR2Q9H4G4 154 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 TREX1Q9NSU2 369 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 A0A096LPE4 126 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 A0A1W2PPZ6 126 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 FAM24AA6NFZ4 105 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 ORM1P02763 201 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 SPCS3P61009 180 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 TGIF2LXQ8IUE1 241 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 OR1J1Q8NGS3 322 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 CHST8Q9H2A9 424 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 NDUFB11Q9NX14 153 aa9.46□□□□□ -0.9
CLIP1-201ENST00000302528 M0R135 149 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 CYC1P08574 325 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 PTBP1P26599 531 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 COL13A1Q5TAT6 717 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF799Q96GE5 643 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 PDLIM5Q96HC4 596 aaKnown RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM147Q9BVK8 224 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 OR5V1Q9UGF6 321 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 CHD4Q14839 1912 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 FIGNL2A6NMB9 653 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 F11P03951 625 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 ALDOCP09972 364 aaKnown RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 CALCRP30988 508 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 NOVP48745 357 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 AGBL4Q5VU57 503 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 MS4A8Q9BY19 250 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 KLF13Q9Y2Y9 288 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-201ENST00000302528 UBE2L5PA0A1B0GUS4 154 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 OR2T8A6NH00 312 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 HTR1DP28221 377 aa9.45□□□□□ -0.9
CLIP1-201ENST00000302528 PPIAP62937 165 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms