RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 GALP22466 123 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 F2RL1P55085 397 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 C17orf67Q0P5P2 114 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 OR51A4Q8NGJ6 313 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ISOC2Q96AB3 205 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF681Q96N22 645 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF286AQ9HBT8 521 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 WASF3Q9UPY6 502 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 BRCA1P38398 1863 aaKnown RBP10.44□□□□□ -0.74
VPS33A-201ENST00000267199 A0A0B4J2E0 115 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 A0A1B0GX12 115 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 SLC17A2O00624 439 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 TK1P04183 234 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 OTX2P32243 289 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 EFNA3P52797 238 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF85Q03923 595 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 SHHQ15465 462 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ELAVL1Q15717 326 aaKnown RBP10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ELFN2Q5R3F8 820 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 LRRC3BQ96PB8 259 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 LDAHQ9H6V9 325 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ANKRD20A5PA0PJZ0 165 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 BHLHE40O14503 412 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 MOSPD3O75425 235 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ANKRD34CP0C6C1 535 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 PPICP45877 212 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF273Q14593 569 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 SLC17A1Q14916 467 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 PWWP2BQ6NUJ5 590 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 PTP4A1Q93096 173 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 MRPL38Q96DV4 380 aaKnown RBP10.44□□□□□ -0.74
VPS33A-201ENST00000267199 WFDC6Q9BQY6 131 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF2Q9BSG1 426 aaPredicted RBP10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ENY2Q9NPA8 101 aa10.44□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF749O43361 778 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 NMBP08949 121 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 DAOP14920 347 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CXCL2P19875 107 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 PJVKQ0ZLH3 352 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ZIC1Q15915 447 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 MRM1Q6IN84 353 aaKnown RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 RPUSD3Q6P087 351 aaKnown RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 GRINAQ7Z429 371 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 PRSS35Q8N3Z0 413 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CLEC1AQ8NC01 280 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 PAPOLGQ9BWT3 736 aaKnown RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ENKD1Q9H0I2 346 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CRLF2Q9HC73 371 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 TMEM218A2RU14 115 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 FAM74A7A6NL05 159 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ST8SIA3O43173 380 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 NKX2-2O95096 273 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 MT-ATP6P00846 226 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CTRB1P17538 263 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 GFERP55789 205 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 OR1D5P58170 312 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ETFDHQ16134 617 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 FAM74A3Q4VXF1 159 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 C9orf152Q5JTZ5 239 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CST9LP1Q5W188 147 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 PLCXD3Q63HM9 321 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 DMKNQ6E0U4 476 aaPredicted RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CTRB2Q6GPI1 263 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 OPN5Q6U736 354 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 OR13C8Q8NGS7 320 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 METTL9Q9H1A3 318 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CHST11Q9NPF2 352 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 MMP17Q9ULZ9 603 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 A0A1W2PPV9 198 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 OTOL1A6NHN0 477 aaPredicted RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 HMSDA8MTL9 139 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 DDAH2O95865 285 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 HPNP05981 417 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 HTRA4P83105 476 aaPredicted RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 TLE4Q04727 773 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF266Q14584 549 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 C5orf46Q6UWT4 87 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 MOB3CQ70IA8 216 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ZFP62Q8NB50 900 aaPredicted RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 NECAP1Q8NC96 275 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 TOLLIPQ9H0E2 274 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 GCM1Q9NP62 436 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 MED29Q9NX70 200 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ZMAT5Q9UDW3 170 aaKnown RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 SUSD2Q9UGT4 822 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 PTRH2Q9Y3E5 179 aaKnown RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 RTTNQ86VV8 2226 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 SCN2AQ99250 2005 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CEBPZOSA8MTT3 80 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 NUDT19A8MXV4 375 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 EIF4E2O60573 245 aaKnown RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ICOSLGO75144 302 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 CTAG2O75638 210 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 AKR7A3O95154 331 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 NAT2P11245 290 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 AGFG1P52594 562 aaKnown RBP10.43□□□□□ -0.74
VPS33A-201ENST00000267199 PRTGQ2VWP7 1150 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 DPPA2Q7Z7J5 298 aa10.43□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF784Q8NCA9 323 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms