RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 C11orf40Q8WZ69 217 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 VN1R1Q9GZP7 353 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 TWSG1Q9GZX9 223 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 GAREM1Q9H706 876 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 ELL3Q9HB65 397 aaPredicted RBP14.96□□□□□ -0.02
SQLE-201ENST00000265896 HPF1Q9NWY4 346 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 HS3ST3A1Q9Y663 406 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 FRG2CA6NGY1 282 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 SULT2B1O00204 365 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 KNG1P01042 644 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 HOXB5P09067 269 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 ZBTB25P24278 435 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 GABRA4P48169 554 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 CSNK1EP49674 416 aaKnown RBP14.95□□□□□ -0.02
SQLE-201ENST00000265896 S100A10P60903 97 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 ETV3LQ6ZN32 361 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 LIPHQ8WWY8 451 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 SLC25A21Q9BQT8 299 aaPredicted RBP14.95□□□□□ -0.02
SQLE-201ENST00000265896 ZNF319Q9P2F9 582 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 RABL2AQ9UBK7 228 aaPredicted RBP14.95□□□□□ -0.02
SQLE-201ENST00000265896 COPS7AQ9UBW8 275 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 RABL2BQ9UNT1 228 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 RHPN2P1A8MT19 583 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 A8MVM7 634 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 BCL2L11O43521 198 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 AQP8O94778 261 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 EMP2P54851 167 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 SLC26A5P58743 744 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 LYG2Q86SG7 212 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 KCNRGQ8N5I3 272 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 ST7LQ8TDW4 575 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 ZNF578Q96N58 590 aaPredicted RBP14.95□□□□□ -0.02
SQLE-201ENST00000265896 GPER1Q99527 375 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 SMIM3Q9BZL3 60 aa14.95□□□□□ -0.02
SQLE-201ENST00000265896 A0A1B0GV50 99 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 TUBAL3A6NHL2 446 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 TMEM200CA6NKL6 621 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 RER1O15258 196 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 RAMP1O60894 148 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 TTRP02766 147 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 GP1BAP07359 652 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 UBBP0CG47 229 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 UBCP0CG48 685 aaKnown RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 IGFBP3P17936 291 aaPredicted RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 POLR2HP52434 150 aaKnown RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 RPS27AP62979 156 aaKnown RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 UBA52P62987 128 aaKnown RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 ZNF260Q3ZCT1 412 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 SLC29A4Q7RTT9 530 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 BATF2Q8N1L9 274 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 GTPBP8Q8N3Z3 284 aaPredicted RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 ASB12Q8WXK4 309 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 SLAMF6Q96DU3 332 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 LIN37Q96GY3 246 aaPredicted RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 PELOQ9BRX2 385 aaKnown RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 SLC7A5P2Q9GIP4 190 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 SLC6A15Q9H2J7 730 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 C1orf198Q9H425 327 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 CHMP1AQ9HD42 196 aaPredicted RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 FER1L5A0AVI2 2057 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 METTL21EPA6NDL7 271 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 F8W036 122 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 H0YIZ8 118 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 SSX5O60225 188 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 BLOC1S1P78537 153 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 CLVS2Q5SYC1 327 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 GLIPR1L1Q6UWM5 242 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 OR4K15Q8NH41 348 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 ASB17Q8WXJ9 295 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 PHB2Q99623 299 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 TLNRD1Q9H1K6 362 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 OR5AC2Q9NZP5 309 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 A0A0A6YYD4 124 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 ZNHIT1O43257 154 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 FOXF1Q12946 379 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 PAN3Q58A45 887 aaKnown RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 LDLRAD3Q86YD5 345 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 PNLDC1Q8NA58 520 aaKnown RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 OR10H5Q8NGA6 315 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 FOXRED1Q96CU9 486 aaPredicted RBP14.94□□□□□ -0.02
SQLE-201ENST00000265896 MMP17Q9ULZ9 603 aa14.94□□□□□ -0.02
SQLE-201ENST00000265896 RALGAPA1Q6GYQ0 2036 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 A0A1B0GTI1 187 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 SULT1C2O00338 296 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 BET1O15155 118 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 FBXO24O75426 580 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 RAD51DO75771 328 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 DXOO77932 396 aaKnown RBP14.93□□□□□ -0.02
SQLE-201ENST00000265896 SFTPBP07988 381 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 HCKP08631 526 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 RCC1P18754 421 aaPredicted RBP14.93□□□□□ -0.02
SQLE-201ENST00000265896 DRD1P21728 446 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 CALCRP30988 508 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 ROM1Q03395 351 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 CFHR1Q03591 330 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 RBM39Q14498 530 aaKnown RBP14.93□□□□□ -0.02
SQLE-201ENST00000265896 MICBQ29980 383 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 ZNF704Q6ZNC4 412 aaPredicted RBP14.93□□□□□ -0.02
SQLE-201ENST00000265896 ACOT7LQ6ZUV0 252 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 MOB3CQ70IA8 216 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms