RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TAF9Q16594 264 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 BAK1Q16611 211 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 ELFN2Q5R3F8 820 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 SUMF1Q8NBK3 374 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 SLC38A9Q8NBW4 561 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 KCNJ15Q99712 375 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 CNTNAP3Q9BZ76 1288 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 BIN3Q9NQY0 253 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 UFSP2Q9NUQ7 469 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 TAS2R5Q9NYW4 299 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 IGHV3-64DA0A0J9YX35 117 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 PMS2P1A4D2B8 440 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 RPA2P15927 270 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 CLINT1Q14677 625 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 ZNF141Q15928 474 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 CEACAM16Q2WEN9 425 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 C8orf82Q6P1X6 216 aaPredicted RBP12.61□□□□□ -0.39
CDH3-201ENST00000264012 CBLN3Q6UW01 205 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 DHRS13Q6UX07 377 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 TCTEX1D2Q8WW35 142 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 GNRHR2Q96P88 292 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 POLDIP2Q9Y2S7 368 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 OR6C6A6NF89 314 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 C4orf47A7E2U8 309 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 ZNF732B4DXR9 585 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 SELEP16581 610 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 RFX2P48378 723 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 HBG1P69891 147 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 HBG2P69892 147 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 AADACL4Q5VUY2 407 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 C16orf47Q6ZP98 133 aaPredicted RBP12.61□□□□□ -0.39
CDH3-201ENST00000264012 LHFPL2Q6ZUX7 228 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 SLIRPQ9GZT3 109 aaKnown RBP12.61□□□□□ -0.39
CDH3-201ENST00000264012 AUNIPQ9H7T9 357 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 DOCK3Q8IZD9 2030 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 ZNF674Q2M3X9 581 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 WIPI1Q5MNZ9 446 aaPredicted RBP12.61□□□□□ -0.39
CDH3-201ENST00000264012 THSD4Q6ZMP0 1018 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 OR4D9Q8NGE8 314 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 OR6K3Q8NGY3 331 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 LRP12Q9Y561 859 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 A0A1W2PQF6 199 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 OR6C68A6NDL8 312 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 SNAPINO95295 136 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 NME2P22392 152 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 FGF9P31371 208 aaPredicted RBP12.6□□□□□ -0.39
CDH3-201ENST00000264012 SLC22A25Q6T423 547 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 C1orf210Q8IVY1 113 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 OR10J5Q8NHC4 309 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 UBL7Q96S82 380 aaPredicted RBP12.6□□□□□ -0.39
CDH3-201ENST00000264012 FAM234AQ9H0X4 552 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 PRELID3BQ9Y3B1 194 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 FAM186AA6NE01 2351 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 SLC22A20A6NK97 555 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 CDC42EP2O14613 210 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 HSD17B6O14756 317 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 HYAL3O43820 417 aaPredicted RBP12.6□□□□□ -0.39
CDH3-201ENST00000264012 LALBAP00709 142 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 IFNA10P01566 189 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 CD3DP04234 171 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 CHRNB4P30926 498 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 OPRM1P35372 400 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 SVBPQ8N300 66 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 RDH5Q92781 318 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 PELI1Q96FA3 418 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 TCEAL7Q9BRU2 100 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 GFOD1Q9NXC2 390 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 PROCRQ9UNN8 238 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 LRRC30A6NM36 301 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 SDCBPO00560 298 aaPredicted RBP12.6□□□□□ -0.39
CDH3-201ENST00000264012 GIPP09681 153 aaPredicted RBP12.6□□□□□ -0.39
CDH3-201ENST00000264012 GABRB1P18505 474 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 BCKDHBP21953 392 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 RHBDD2Q6NTF9 364 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 PWWP2BQ6NUJ5 590 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 OR51H1Q8NH63 302 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 H1FXQ92522 213 aaKnown RBP12.6□□□□□ -0.39
CDH3-201ENST00000264012 ZNF2Q9BSG1 426 aaPredicted RBP12.6□□□□□ -0.39
CDH3-201ENST00000264012 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 SPTA1P02549 2419 aa12.6□□□□□ -0.39
CDH3-201ENST00000264012 A0A0U1RQK1 487 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 RGS11O94810 467 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 GLI4P10075 376 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 GNB3P16520 340 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 TAS2R30P59541 319 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 RPS23P62266 143 aaKnown RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 FMODQ06828 376 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 EIF3IQ13347 325 aaKnown RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 HSD17B11Q8NBQ5 300 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 OR4A16Q8NH70 328 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 AKR7LQ8NHP1 331 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 FAM213BQ8TBF2 198 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 GSX2Q9BZM3 304 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 PCOLCE2Q9UKZ9 415 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 MTCH2Q9Y6C9 303 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 COL11A1P12107 1806 aaPredicted RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 NKX6-3A6NJ46 265 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 MT-CO3P00414 261 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms