RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 BARX1Q9HBU1 254 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ACKR4Q9NPB9 350 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 TMEM218A2RU14 115 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 FBXO24O75426 580 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 KNG1P01042 644 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 ABCD3P28288 659 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 TLE3Q04726 772 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 UNC119Q13432 240 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 RBM39Q14498 530 aaKnown RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 TEX30Q5JUR7 227 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 WDFY1Q8IWB7 410 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 LINC00518Q8N0U6 118 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 SVBPQ8N300 66 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 OR51E1Q8TCB6 317 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 SMIM3Q9BZL3 60 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 ADAM19Q9H013 955 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 KCNK7Q9Y2U2 307 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 A0A1B0GTQ1 180 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 MEGF11A6BM72 1044 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 WIPF3A6NGB9 483 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 RAB27BO00194 218 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 SULT1C2O00338 296 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 GIMD1P0DJR0 217 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 PSMB6P28072 239 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 HSD11B1P28845 292 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 CRABP1P29762 137 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 POLR2HP52434 150 aaKnown RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 SCRN3Q0VDG4 424 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 ABHD12BQ7Z5M8 362 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 SPAG16Q8N0X2 631 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 SLC26A10Q8NG04 563 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 TLNRD1Q9H1K6 362 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 DUSP15Q9H1R2 295 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 CD207Q9UJ71 328 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 A0A1B0GTI1 187 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 A8MVM7 634 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 CD8AP01732 235 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 TPT1P13693 172 aaKnown RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 ADCYAP1P18509 176 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 NME2P22392 152 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 CDAP32320 146 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 CAPZBP47756 277 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 IGLV3-21P80748 117 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 EBPQ15125 230 aaKnown RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 SLC25A42Q86VD7 318 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 SLC17A5Q9NRA2 495 aa11.06□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF629Q9UEG4 869 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-201ENST00000263856 PLPP3O14495 311 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 SIGLEC6O43699 453 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 POU2F2P09086 479 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 VSIG8P0DPA2 414 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF93P35789 620 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 NPBWR1P48145 328 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 BIDP55957 195 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 SLC26A5P58743 744 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF260Q3ZCT1 412 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 TMEM244Q5VVB8 128 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF704Q6ZNC4 412 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 ARHGEF39Q8N4T4 335 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 EIF4E3Q8N5X7 224 aaKnown RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 OR5AP2Q8NGF4 316 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF519Q8TB69 540 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 LIPHQ8WWY8 451 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 ARL11Q969Q4 196 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 MRGPRFQ96AM1 343 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 C12orf57Q99622 126 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 CMSS1Q9BQ75 279 aaKnown RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 NKX2-4Q9H2Z4 354 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 G6PC2Q9NQR9 355 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 PURGQ9UJV8 347 aaKnown RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 RAB22AQ9UL26 194 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 SLC5A6Q9Y289 635 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 A0A1B0GV50 99 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 FRG2CA6NGY1 282 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 SOCS1O15524 211 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 CRTAPO75718 401 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 SCGB1D2O95969 90 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 SERPINA5P05154 406 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 CBR1P16152 277 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 BCKDHBP21953 392 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 FLI1Q01543 452 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 GLIPR1L1Q6UWM5 242 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 TMEM104Q8NE00 496 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 OR51F2Q8NH61 342 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 SLAMF6Q96DU3 332 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 RRNAD1Q96FB5 475 aaKnown RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 CNTNAP3BQ96NU0 1288 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 SLCO5A1Q9H2Y9 848 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 DZANK1Q9NVP4 752 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 VSX1Q9NZR4 365 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF175Q9Y473 711 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 RALGAPA1Q6GYQ0 2036 aa11.05□□□□□ -0.64
CHMP3-201ENST00000263856 CRHP06850 196 aa11.04□□□□□ -0.64
CHMP3-201ENST00000263856 OR3A2P47893 321 aa11.04□□□□□ -0.64
CHMP3-201ENST00000263856 SSBP1Q04837 148 aaKnown RBP11.04□□□□□ -0.64
CHMP3-201ENST00000263856 LPCAT3Q6P1A2 487 aa11.04□□□□□ -0.64
CHMP3-201ENST00000263856 PAQR4Q8N4S7 273 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms