RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ACTA2P62736 377 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ACTG2P63267 376 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 SLC35A2P78381 396 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ADIPOQQ15848 244 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 RGS7BPQ6MZT1 257 aaPredicted RBP14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 EGFL6Q8IUX8 553 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF786Q8N393 782 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 YIPF7Q8N8F6 280 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 MARS2Q96GW9 593 aaKnown RBP14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 MYCBPQ99417 103 aaPredicted RBP14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 OR2J1Q9GZK6 312 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 DUSP21Q9H596 190 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 UBTD1Q9HAC8 227 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 TUBG2Q9NRH3 451 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 SPG11Q96JI7 2443 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 TMEM269A0A1B0GVZ9 245 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 VSTM5A8MXK1 200 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 SRSF10O75494 262 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 DANCRP0C864 163 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 TTKP33981 857 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 ETV1P50549 477 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 FABP6P51161 128 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 OR12D2P58182 307 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 SNAI3Q3KNW1 292 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 TP53I3Q53FA7 332 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 RBM48Q5RL73 367 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 SPATA46Q5T0L3 261 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 LIPNQ5VXI9 398 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 SYS1Q8N2H4 156 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 STX19Q8N4C7 294 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 OR5L1Q8NGL2 311 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 SLC25A40Q8TBP6 338 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 MRPL24Q96A35 216 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 MRPL48Q96GC5 212 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 SP140LQ9H930 580 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 PAK1IP1Q9NWT1 392 aaPredicted RBP14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 FAM206AQ9NX38 181 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 EXOSC1Q9Y3B2 195 aaKnown RBP14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 CMAHPQ9Y471 501 aa14.29□□□□□ -0.12
CHCHD3-201ENST00000262570 AKAP6Q13023 2319 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 C5orf63A6NC05 138 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 CDK1P06493 297 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 ANXA2P07355 339 aaKnown RBP14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 TACSTD2P09758 323 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 OR4A8P0C604 315 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF250P15622 560 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 MYL12AP19105 171 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 SERPINF1P36955 418 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF829Q3KNS6 432 aaPredicted RBP14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 FAM57BQ71RH2 274 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 MUC15Q8N387 334 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 OR52H1Q8NGJ2 320 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 KLF14Q8TD94 323 aaPredicted RBP14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 SGCDQ92629 289 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 MYDGFQ969H8 173 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 C4orf36Q96KX1 117 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 POFUT1Q9H488 388 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 BRD7Q9NPI1 651 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 ACOXLQ9NUZ1 547 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF319Q9P2F9 582 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 CLEC2DQ9UHP7 191 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 GNG8Q9UK08 70 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 N6AMT1Q9Y5N5 214 aa14.28□□□□□ -0.12
CHCHD3-201ENST00000262570 ACOD1A6NK06 481 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 H3BSA7 217 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 J3QLW9 94 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 PNPP00491 289 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 SOD3P08294 240 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF19P17023 458 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF718Q3SXZ3 478 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 MBNL2Q5VZF2 373 aaKnown RBP14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 C20orf204Q6ZNR8 217 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 FAM220AQ7Z4H9 259 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 FBXL14Q8N1E6 418 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 RORBQ92753 470 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 RNF166Q96A37 237 aaPredicted RBP14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 SIGLEC11Q96RL6 698 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 MRPL37Q9BZE1 423 aaKnown RBP14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 ISG20L2Q9H9L3 353 aaKnown RBP14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 FAIMQ9NVQ4 179 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 CHCHD3Q9NX63 227 aaKnown RBP14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 BLOC1S6Q9UL45 172 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 FZR1Q9UM11 496 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 CAB39Q9Y376 341 aaPredicted RBP14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 R4GMQ9 66 aa14.27□□□□□ -0.12
CHCHD3-201ENST00000262570 ITPR2Q14571 2701 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 IGLV3-9A0A075B6K5 115 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 TMEM129A0AVI4 362 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 RPP14O95059 124 aaKnown RBP14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 MPV17P39210 176 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 MFGE8Q08431 387 aaPredicted RBP14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 GK2Q14410 553 aaPredicted RBP14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 EFNB3Q15768 340 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 MST1LQ2TV78 715 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 RNLSQ5VYX0 342 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 FBXW12Q6X9E4 464 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 DTX2Q86UW9 622 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 LRP11Q86VZ4 500 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 SYNPRQ8TBG9 265 aa14.26□□□□□ -0.13
CHCHD3-201ENST00000262570 PELI1Q96FA3 418 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms