RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SLC22A4Q9H015 551 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 CCDC134Q9H6E4 229 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 UNKLQ9H9P5 680 aaKnown RBP10.27□□□□□ -0.77
TRAF4-202ENST00000262396 FN3KRPQ9HA64 309 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 TMEM165Q9HC07 324 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 DCAF13Q9NV06 445 aaKnown RBP10.27□□□□□ -0.77
TRAF4-202ENST00000262396 ERVK-18Q9QC07 812 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 MAGEL2Q9UJ55 1249 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 POLR3KQ9Y2Y1 108 aaPredicted RBP10.27□□□□□ -0.77
TRAF4-202ENST00000262396 LHFPL6Q9Y693 200 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 DYSFO75923 2080 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 hCG_1807616A0A1W2PRN6 198 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 A6NLC8 198 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 HIST1H1CP16403 213 aaKnown RBP10.26□□□□□ -0.77
TRAF4-202ENST00000262396 RRM2P31350 389 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 CD80P33681 288 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 PRSS12P56730 875 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 PAX8Q06710 450 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 MZT1Q08AG7 82 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 COX10Q12887 443 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 TRAP1Q12931 704 aaKnown RBP10.26□□□□□ -0.77
TRAF4-202ENST00000262396 SEC23BQ15437 767 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 KLF17Q5JT82 389 aaPredicted RBP10.26□□□□□ -0.77
TRAF4-202ENST00000262396 CLEC12AQ5QGZ9 265 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 CD276Q5ZPR3 534 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 CPLX4Q7Z7G2 160 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 OR6V1Q8N148 313 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 LNX2Q8N448 690 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 PCGF1Q9BSM1 259 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 COPS4Q9BT78 406 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 FN3KQ9H479 309 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 MED4Q9NPJ6 270 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 TRIM36Q9NQ86 728 aa10.26□□□□□ -0.77
TRAF4-202ENST00000262396 M0R135 149 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 ARPC3O15145 178 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 MLNRO43193 412 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 ENSAO43768 121 aaKnown RBP10.25□□□□□ -0.77
TRAF4-202ENST00000262396 IDH3BO43837 385 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 RNASE1P07998 156 aaKnown RBP10.25□□□□□ -0.77
TRAF4-202ENST00000262396 ACSM4P0C7M7 580 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 IGHV4-38-2P0DP08 117 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 CA6P23280 308 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 PRDX6P30041 224 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRAF4-202ENST00000262396 GK2Q14410 553 aaPredicted RBP10.25□□□□□ -0.77
TRAF4-202ENST00000262396 ZNF181Q2M3W8 571 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 ZNF404Q494X3 552 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 SAMD4BQ5PRF9 694 aaKnown RBP10.25□□□□□ -0.77
TRAF4-202ENST00000262396 FAM201AQ5SY85 155 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 PRAMEF6Q5VXH4 476 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 SLC18B1Q6NT16 456 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 CFAP77Q6ZQR2 320 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 C17orf107Q6ZR85 190 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 DCDC5Q6ZRR9 648 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 C19orf18Q8NEA5 215 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 SLC26A10Q8NG04 563 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 OR10S1Q8NGN2 331 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 OR2T4Q8NH00 348 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 ZNF799Q96GE5 643 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 ADAT1Q9BUB4 502 aaKnown RBP10.25□□□□□ -0.77
TRAF4-202ENST00000262396 CENPMQ9NSP4 180 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 RNF7Q9UBF6 113 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 ABCD2Q9UBJ2 740 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 KCNG2Q9UJ96 466 aa10.25□□□□□ -0.77
TRAF4-202ENST00000262396 IGLV1-36A0A0B4J1U3 117 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 KIR2DS1A0A191URI9 304 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 POM121CA8CG34 1229 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 DCTN6O00399 190 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 PHYHO14832 338 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 TMPRSS2O15393 492 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 ADAM20O43506 726 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 FAM20BO75063 409 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 GRPP07492 148 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 SPARCP09486 303 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 PPIAL4GP0DN37 164 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 NPY4RP50391 375 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 FGF12P61328 243 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 SLC9A3R2Q15599 337 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 SFRP4Q6FHJ7 346 aaPredicted RBP10.24□□□□□ -0.77
TRAF4-202ENST00000262396 RPL13AP3Q6NVV1 102 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 C8orf82Q6P1X6 216 aaPredicted RBP10.24□□□□□ -0.77
TRAF4-202ENST00000262396 C16orf87Q6PH81 154 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 TSEN54Q7Z6J9 526 aaKnown RBP10.24□□□□□ -0.77
TRAF4-202ENST00000262396 FAM86B1Q8N7N1 296 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 CELF2-AS1Q8N7Q2 184 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 OR8S1Q8NH09 359 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 OTULINQ96BN8 352 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 UPRTQ96BW1 309 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 C7orf34Q96L11 122 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 GORASP2Q9H8Y8 452 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 TBC1D23Q9NUY8 699 aa10.24□□□□□ -0.77
TRAF4-202ENST00000262396 ARHGAP32A7KAX9 2087 aa10.23□□□□□ -0.77
TRAF4-202ENST00000262396 TRAV38-1A0A0B4J264 116 aa10.23□□□□□ -0.77
TRAF4-202ENST00000262396 TVP23AA6NH52 213 aa10.23□□□□□ -0.77
TRAF4-202ENST00000262396 ANKRD30BLA7E2S9 258 aa10.23□□□□□ -0.77
TRAF4-202ENST00000262396 CD300LBA8K4G0 201 aa10.23□□□□□ -0.77
TRAF4-202ENST00000262396 TNFRSF11BO00300 401 aa10.23□□□□□ -0.77
TRAF4-202ENST00000262396 HOXA3O43365 443 aaPredicted RBP10.23□□□□□ -0.77
TRAF4-202ENST00000262396 TBX1O43435 398 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms