RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 SRSF10O75494 262 aaKnown RBP23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 NR4A1P22736 598 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 PCSK6P29122 969 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 ZNF773Q6PK81 442 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 APOBEC3DQ96AK3 386 aaPredicted RBP23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 C1QTNF5Q9BXJ0 243 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 ZNF696Q9H7X3 374 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 SPEF1Q9Y4P9 236 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 E9PI62 339 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 TBX1O43435 398 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 RGS6P49758 472 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 WNT4P56705 351 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 ERVS71-1P61550 626 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 DOC2BQ14184 412 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 SPATA46Q5T0L3 261 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 VHLLQ6RSH7 139 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 PRSS45Q7RTY3 260 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 NEUROG1Q92886 237 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 PGAM5Q96HS1 289 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 TBCCD1Q9NVR7 557 aa23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 HEATR1Q9H583 2144 aaKnown RBP23.5■■□□□ 1.35
CHMP4B-201ENST00000217402 PKDREJQ9NTG1 2253 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 GPRIN2O60269 458 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 ICMTO60725 284 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 MRPS14O60783 128 aaKnown RBP23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 LCKP06239 509 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 RAD52P43351 418 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 MMP16P51512 607 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 GTF2A1P52655 376 aaPredicted RBP23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 GBX2P52951 348 aaPredicted RBP23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 MED22Q15528 200 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 COLCA1Q6ZS62 124 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 SPARTQ8N0X7 666 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 ZNF485Q8NCK3 441 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 OR1J1Q8NGS3 322 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 PPP1R14AQ96A00 147 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 RNF166Q96A37 237 aaPredicted RBP23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 OR5M11Q96RB7 305 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 TMEM204Q9BSN7 226 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 POFUT1Q9H488 388 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 STARD10Q9Y365 291 aa23.49■■□□□ 1.35
CHMP4B-201ENST00000217402 LALBAP00709 142 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 PPP1CBP62140 327 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 GFOD2Q3B7J2 385 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 BCL2L15Q5TBC7 163 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 XAF1Q6GPH4 301 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 ZNF704Q6ZNC4 412 aaPredicted RBP23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 TSPAN14Q8NG11 270 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 OR8B12Q8NGG6 310 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 PBOV1Q9GZY1 135 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 BABAM2Q9NXR7 383 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 ZNF319Q9P2F9 582 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 OR52A1Q9UKL2 312 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 LSM2Q9Y333 95 aaKnown RBP23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 NKX6-1P78426 367 aaPredicted RBP23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 TBCEQ15813 527 aaPredicted RBP23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 HIST2H2BCQ6DN03 193 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 UNQ6126/PRO20091Q6UXV3 157 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 SVOPQ8N4V2 548 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 BCL2L14Q9BZR8 327 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 G6PC2Q9NQR9 355 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 PTTG3PQ9NZH4 202 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 SLC22A13Q9Y226 551 aa23.48■■□□□ 1.35
CHMP4B-201ENST00000217402 NANOS3P60323 173 aaKnown RBP23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 EMX1Q04741 257 aaPredicted RBP23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 SPHARQ15513 63 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 WDR38Q5JTN6 314 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 CATSPERDQ86XM0 798 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 EGFL6Q8IUX8 553 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 PRSS35Q8N3Z0 413 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 NUP37Q8NFH4 326 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 OR2AE1Q8NHA4 323 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 MOB1AQ9H8S9 216 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 SP140LQ9H930 580 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 ACOT13Q9NPJ3 140 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 TRIM36Q9NQ86 728 aa23.47■■□□□ 1.35
CHMP4B-201ENST00000217402 ODF4Q2M2E3 257 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 GLYATL3Q5SZD4 288 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 ZFP41Q8N8Y5 198 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 OR52H1Q8NGJ2 320 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 OR2G2Q8NGZ5 317 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 SLC25A40Q8TBP6 338 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 OR2J1Q9GZK6 312 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 OR10A2Q9H208 303 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 CA10Q9NS85 328 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 NUFIP1Q9UHK0 495 aaKnown RBP23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 FZR1Q9UM11 496 aa23.46■■□□□ 1.35
CHMP4B-201ENST00000217402 A0A1W2PPR1 153 aa23.45■■□□□ 1.34
CHMP4B-201ENST00000217402 THBS4P35443 961 aa23.45■■□□□ 1.34
CHMP4B-201ENST00000217402 MRPL28Q13084 256 aaKnown RBP23.45■■□□□ 1.34
CHMP4B-201ENST00000217402 LILRB1Q8NHL6 650 aaPredicted RBP23.45■■□□□ 1.34
CHMP4B-201ENST00000217402 FRRS1LQ9P0K9 344 aa23.45■■□□□ 1.34
CHMP4B-201ENST00000217402 E7EQL1 145 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 J3QW42 95 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 GOSR1O95249 250 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 ATE1O95260 518 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 RPSAP08865 295 aaKnown RBP23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 ATP6V1B1P15313 513 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 GLRXP35754 106 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 KIR3DL2P43630 455 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms