RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 PNRC2Q9NPJ4 139 aaKnown RBP12.78□□□□□ -0.36
PHGDH-231ENST00000641939 PTTG3PQ9NZH4 202 aa12.78□□□□□ -0.36
PHGDH-231ENST00000641939 COMMD3-BMI1R4GMX3 469 aa12.78□□□□□ -0.36
PHGDH-231ENST00000641939 F5H5K5 113 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 DEAF1O75398 565 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-231ENST00000641939 CD55P08174 381 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 ACSM4P0C7M7 580 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 CLUP10909 449 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 OSMP13725 252 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 ANXA8P13928 327 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 PRKACGP22612 351 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 RPS27P42677 84 aaKnown RBP12.77□□□□□ -0.37
PHGDH-231ENST00000641939 CDK5R2Q13319 367 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 CCNIQ14094 377 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 HLXQ14774 488 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-231ENST00000641939 HFEQ30201 348 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 SLC27A4Q6P1M0 643 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 FBXW12Q6X9E4 464 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 PRIMA1Q86XR5 153 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 OR6K6Q8NGW6 343 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 MAP6Q96JE9 813 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 C1QTNF5Q9BXJ0 243 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 WDR76Q9H967 626 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 CDC42EP3Q9UKI2 254 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 KCNS2Q9ULS6 477 aa12.77□□□□□ -0.37
PHGDH-231ENST00000641939 TIPRLO75663 272 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 TGFAP01135 160 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 PSKH1P11801 424 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 TNFSF4P23510 183 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 ENTPD1P49961 510 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 BLVRAP53004 296 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 TPTEP56180 551 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 TNFAIP6P98066 277 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-231ENST00000641939 GINS1Q14691 196 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 PCK2Q16822 640 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 SHQ1Q6PI26 577 aaKnown RBP12.76□□□□□ -0.37
PHGDH-231ENST00000641939 Q6ZR03 302 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 COLCA1Q6ZS62 124 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 DCXRQ7Z4W1 244 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 LINC01356Q8N9X3 169 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 ATG16L2Q8NAA4 619 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 ZNF511Q8NB15 262 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 OR2Z1Q8NG97 314 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 OR10S1Q8NGN2 331 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 CLDND2Q8NHS1 167 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 NRBF2Q96F24 287 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 C1orf159Q96HA4 380 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 NARFLQ9H6Q4 476 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 MED20Q9H944 212 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 NTN4Q9HB63 628 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 DDX28Q9NUL7 540 aaKnown RBP12.76□□□□□ -0.37
PHGDH-231ENST00000641939 CACNG2Q9Y698 323 aa12.76□□□□□ -0.37
PHGDH-231ENST00000641939 FAM183AA6NL82 134 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 CLDN25C9JDP6 229 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 M0R135 149 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 ZNF593O00488 134 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-231ENST00000641939 WNT9BO14905 357 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 SPARCP09486 303 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 PAICSP22234 425 aaKnown RBP12.75□□□□□ -0.37
PHGDH-231ENST00000641939 IGFBP5P24593 272 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 CDH15P55291 814 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 TEX30Q5JUR7 227 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 LINC01590Q5TEZ4 76 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 C1orf146Q5VVC0 180 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 OR2T2Q6IF00 324 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 ACSM5Q6NUN0 579 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 DNAJC9Q8WXX5 260 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 CCL17Q92583 94 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 UTP4Q969X6 686 aaKnown RBP12.75□□□□□ -0.37
PHGDH-231ENST00000641939 OTULINQ96BN8 352 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 ZNF799Q96GE5 643 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 HCAR1Q9BXC0 346 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 KIF17Q9P2E2 1029 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 LPAR3Q9UBY5 353 aa12.75□□□□□ -0.37
PHGDH-231ENST00000641939 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 COL6A5A8TX70 2615 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 LCATP04180 440 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 HMGN1P05114 100 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 TNFRSF1AP19438 455 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 CDK5Q00535 292 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 SLC3A1Q07837 685 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 MALLQ13021 153 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 SPRNQ5BIV9 151 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 AVPI1Q5T686 147 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 NAA40Q86UY6 237 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 OR5AS1Q8N127 324 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 OR8G5Q8NG78 346 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 OR5K1Q8NHB7 308 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 RAB1CQ92928 201 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 TIMD4Q96H15 378 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 ZNF582Q96NG8 517 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-231ENST00000641939 COPS4Q9BT78 406 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 BEX2Q9BXY8 128 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 TREM2Q9NZC2 230 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
PHGDH-231ENST00000641939 IQCF6A8MYZ5 107 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 B4DSR2 109 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms