RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 LEG1Q6P5S2 330 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 CORO6Q6QEF8 472 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 C16orf89Q6UX73 402 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 FBXW12Q6X9E4 464 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 HIST2H3AQ71DI3 136 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 JAZF1Q86VZ6 243 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 DEFB107AQ8IZN7 70 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 BPIFB2Q8N4F0 458 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 KLHL36Q8N4N3 616 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 DEFB108BQ8NET1 73 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 GORASP2Q9H8Y8 452 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
SRRT-219ENST00000641476 PPP1R3CQ9UQK1 317 aa12.29□□□□□ -0.44
SRRT-219ENST00000641476 PRKDCP78527 4128 aaKnown RBP12.29□□□□□ -0.44
SRRT-219ENST00000641476 A8MXK9 166 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 ARPC2O15144 300 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 HSD17B1P14061 328 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 HIST1H1CP16403 213 aaKnown RBP12.28□□□□□ -0.44
SRRT-219ENST00000641476 UBA52P62987 128 aaKnown RBP12.28□□□□□ -0.44
SRRT-219ENST00000641476 COX10Q12887 443 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 FOXL1Q12952 345 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 OR2T2Q6IF00 324 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 ZNF620Q6ZNG0 422 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 CFAP77Q6ZQR2 320 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 OR6V1Q8N148 313 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 ZDHHC22Q8N966 263 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 SLC26A10Q8NG04 563 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 PTP4A1Q93096 173 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 APOBEC3DQ96AK3 386 aaPredicted RBP12.28□□□□□ -0.44
SRRT-219ENST00000641476 PYURFQ96I23 114 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 MEGF10Q96KG7 1140 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 CDRT15Q96T59 188 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 NMNAT3Q96T66 252 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 C1orf21Q9H246 121 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 FN3KQ9H479 309 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 NDE1Q9NXR1 346 aa12.28□□□□□ -0.44
SRRT-219ENST00000641476 CEACAM18A8MTB9 384 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 TMEM178BH3BS89 294 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 EBAG9O00559 213 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 ARPC3O15145 178 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 MLNRO43193 412 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 OR10H3O60404 316 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 RENP00797 406 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 FABP3P05413 133 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 RRM2P31350 389 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 MDH2P40926 338 aaKnown RBP12.27□□□□□ -0.45
SRRT-219ENST00000641476 SMIM11AP58511 58 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 RFX4Q33E94 735 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 ARMCX4Q5H9R4 360 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 SLC18B1Q6NT16 456 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 LRRC28Q86X40 367 aaPredicted RBP12.27□□□□□ -0.45
SRRT-219ENST00000641476 LINC00346Q8IVM7 164 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 ATG16L2Q8NAA4 619 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 BHLHE23Q8NDY6 225 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 SDR9C7Q8NEX9 313 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 OR8G5Q8NG78 346 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 OR5L1Q8NGL2 311 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 OR4K13Q8NH42 304 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 C22orf15Q8WYQ4 148 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 POP5Q969H6 163 aaKnown RBP12.27□□□□□ -0.45
SRRT-219ENST00000641476 NSMCE2Q96MF7 247 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 IFT27Q9BW83 186 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 WDR76Q9H967 626 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 GCM1Q9NP62 436 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 RPRD1BQ9NQG5 326 aaKnown RBP12.27□□□□□ -0.45
SRRT-219ENST00000641476 MMP26Q9NRE1 261 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 B9D1Q9UPM9 204 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 POLR3KQ9Y2Y1 108 aaPredicted RBP12.27□□□□□ -0.45
SRRT-219ENST00000641476 PPIAL4AQ9Y536 164 aa12.27□□□□□ -0.45
SRRT-219ENST00000641476 IQCF6A8MYZ5 107 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 HKR1P10072 659 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 ZNF12P17014 697 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 MSX2P35548 267 aaPredicted RBP12.26□□□□□ -0.45
SRRT-219ENST00000641476 GSSP48637 474 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 PRSS12P56730 875 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 ZNF154Q13106 437 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 ESCO2Q56NI9 601 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 SAMD4BQ5PRF9 694 aaKnown RBP12.26□□□□□ -0.45
SRRT-219ENST00000641476 CCDC121Q6ZUS5 278 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 ZBTB46Q86UZ6 589 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 MUC20Q8N307 709 aaPredicted RBP12.26□□□□□ -0.45
SRRT-219ENST00000641476 OR13G1Q8NGZ3 307 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 ZNF420Q8TAQ5 688 aaPredicted RBP12.26□□□□□ -0.45
SRRT-219ENST00000641476 DVL3Q92997 716 aaPredicted RBP12.26□□□□□ -0.45
SRRT-219ENST00000641476 MCUR1Q96AQ8 359 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 ATF6BQ99941 703 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 SLC30A2Q9BRI3 323 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 BTBD10Q9BSF8 475 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 DDX28Q9NUL7 540 aaKnown RBP12.26□□□□□ -0.45
SRRT-219ENST00000641476 CD300AQ9UGN4 299 aa12.26□□□□□ -0.45
SRRT-219ENST00000641476 H0YL77 283 aa12.25□□□□□ -0.45
SRRT-219ENST00000641476 TRAPPC2LH3BP13 241 aa12.25□□□□□ -0.45
SRRT-219ENST00000641476 IFNL4K9M1U5 179 aa12.25□□□□□ -0.45
SRRT-219ENST00000641476 GYG2O15488 501 aa12.25□□□□□ -0.45
SRRT-219ENST00000641476 ATP5HO75947 161 aa12.25□□□□□ -0.45
SRRT-219ENST00000641476 CYB5R3P00387 301 aaPredicted RBP12.25□□□□□ -0.45
SRRT-219ENST00000641476 ACSM4P0C7M7 580 aa12.25□□□□□ -0.45
SRRT-219ENST00000641476 NOS3P29474 1203 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms