RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 PNPP00491 289 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 HLA-AP01891 365 aaKnown RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 RIDAP52758 137 aaKnown RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 HSD17B7P56937 341 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 RBM39Q14498 530 aaKnown RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 TEX30Q5JUR7 227 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 C15orf54Q8N8G6 183 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 STOML3Q8TAV4 291 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ASB5Q8WWX0 329 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 PPP1R14AQ96A00 147 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ZBTB8AQ96BR9 441 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 MMABQ96EY8 250 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 SLC25A44Q96H78 314 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 MAP3K3Q99759 626 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 CMKLR1Q99788 373 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 TCEAL2Q9H3H9 227 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 ZNF576Q9H609 170 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 UQCC1Q9NVA1 299 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 FBXO4Q9UKT5 387 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 TNFSF18Q9UNG2 199 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 COLQQ9Y215 455 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 A0A1B0GTI1 187 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 MEGF11A6BM72 1044 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 NUDT19A8MXV4 375 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 C17orf105B2RV13 164 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ALOX12BO75342 701 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 NSA2O95478 260 aaKnown RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 PLGP00747 810 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 ADAM8P78325 824 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 NR0B2Q15466 257 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 PLEKHN1Q494U1 663 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 AKIRIN2Q53H80 203 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ZNF542PQ5EBM4 170 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ASPHD2Q6ICH7 369 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ADGRE4PQ86SQ3 457 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 CPNE2Q96FN4 548 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 MRGPRX1Q96LB2 322 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 TMPRSS5Q9H3S3 457 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ZMAT3Q9HA38 289 aaKnown RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 TAS2R4Q9NYW5 299 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ZNF107Q9UII5 783 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 HEATR5AQ86XA9 2040 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 A0A0A6YYH2 397 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 A0A1W2PPC1 479 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 A0A1W2PPE3 182 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 DCDC2BA2VCK2 349 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 PRSS37A4D1T9 235 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 A6NJ64 397 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 HCRTR2O43614 444 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 OR2T1O43869 369 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 SLC16A7O60669 478 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 CSN2P05814 226 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 SLC25A4P12235 298 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ZNF28P17035 718 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 DLSTP36957 453 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 SLC6A8P48029 635 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 DNASE1L1P49184 302 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ROM1Q03395 351 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 PMPCAQ10713 525 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ATXN7L3Q14CW9 347 aaPredicted RBP7.8□□□□□ -1.16
VCL-207ENST00000624354 ZNF813Q6ZN06 617 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 MAMDC2Q7Z304 686 aaPredicted RBP7.8□□□□□ -1.16
VCL-207ENST00000624354 TMEM200AQ86VY9 491 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ZNF584Q8IVC4 421 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 JAGN1Q8N5M9 183 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 METTL27Q8N6F8 245 aaPredicted RBP7.8□□□□□ -1.16
VCL-207ENST00000624354 OR13H1Q8NG92 308 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ZNF524Q96C55 264 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 SLC25A36Q96CQ1 311 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 SEC22AQ96IW7 307 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ADAM19Q9H013 955 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 PRDM6Q9NQX0 595 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 CGGBP1Q9UFW8 167 aaPredicted RBP7.8□□□□□ -1.16
VCL-207ENST00000624354 TICRRQ7Z2Z1 1910 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 TRAV36DV7A0A075B6V5 113 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 NUDT14O95848 222 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 CD74P04233 296 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 CELA2BP08218 269 aaPredicted RBP7.8□□□□□ -1.16
VCL-207ENST00000624354 ZNF735P0CB33 412 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 NQO2P16083 231 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 PPICP45877 212 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 STARD6P59095 220 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 CXADRP78310 365 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 TFF2Q03403 129 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 MEF2DQ14814 521 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ACKR1Q16570 336 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 PRAMEF17Q5VTA0 474 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 PAPD4Q6PIY7 484 aaKnown RBP7.8□□□□□ -1.16
VCL-207ENST00000624354 ACOT7LQ6ZUV0 252 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ABCA7Q8IZY2 2146 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 PPP1R1CQ8WVI7 109 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 ADOQ96SZ5 270 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 PRRT1Q99946 306 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 LAT2Q9GZY6 243 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 NXF5Q9H1B4 397 aaKnown RBP7.8□□□□□ -1.16
VCL-207ENST00000624354 S1PR5Q9H228 398 aa7.8□□□□□ -1.16
VCL-207ENST00000624354 C8orf33Q9H7E9 229 aaPredicted RBP7.8□□□□□ -1.16
VCL-207ENST00000624354 MRPS18BQ9Y676 258 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms