RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 SURF4O15260 269 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 LMX1BO60663 402 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 LILRA1O75019 489 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 TIPRLO75663 272 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 TGFAP01135 160 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 LCATP04180 440 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 HMGN1P05114 100 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 OSMP13725 252 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 HNF1AP20823 631 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 KITLGP21583 273 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 CRYBB2P43320 205 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 ENTPD1P49961 510 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 TNFAIP6P98066 277 aaPredicted RBP11.4□□□□□ -0.58
SENP3-209ENST00000610454 SLC3A1Q07837 685 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 TRIP10Q15642 601 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 ZNF362Q5T0B9 420 aaPredicted RBP11.4□□□□□ -0.58
SENP3-209ENST00000610454 SHQ1Q6PI26 577 aaKnown RBP11.4□□□□□ -0.58
SENP3-209ENST00000610454 DCXRQ7Z4W1 244 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 PEG10Q86TG7 708 aaKnown RBP11.4□□□□□ -0.58
SENP3-209ENST00000610454 HS3ST5Q8IZT8 346 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 OR2Z1Q8NG97 314 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 CCL17Q92583 94 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 HAVCR1Q96D42 359 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 MSI2Q96DH6 328 aaKnown RBP11.4□□□□□ -0.58
SENP3-209ENST00000610454 NRBF2Q96F24 287 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 DDOQ99489 341 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 COPS4Q9BT78 406 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 SHARPINQ9H0F6 387 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 POFUT1Q9H488 388 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 LPAR3Q9UBY5 353 aa11.4□□□□□ -0.58
SENP3-209ENST00000610454 FAM183AA6NL82 134 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 PRR23D1E9PI22 279 aaPredicted RBP11.39□□□□□ -0.59
SENP3-209ENST00000610454 M0R135 149 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 RP2O75695 350 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 ADH4P08319 380 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 ACSM4P0C7M7 580 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 PRR23D2P0DMB1 279 aaPredicted RBP11.39□□□□□ -0.59
SENP3-209ENST00000610454 CLUP10909 449 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 FCGR1AP12314 374 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 SELEP16581 610 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 PRKACGP22612 351 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 RPS27P42677 84 aaKnown RBP11.39□□□□□ -0.59
SENP3-209ENST00000610454 GINS1Q14691 196 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 HLXQ14774 488 aaPredicted RBP11.39□□□□□ -0.59
SENP3-209ENST00000610454 FBXW12Q6X9E4 464 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 CCDC121Q6ZUS5 278 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 HIPK1Q86Z02 1210 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 OR5AS1Q8N127 324 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 LINC01356Q8N9X3 169 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 ZNF511Q8NB15 262 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 RAB1CQ92928 201 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 SLCO4A1Q96BD0 722 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 ZNF799Q96GE5 643 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 ZNF582Q96NG8 517 aaPredicted RBP11.39□□□□□ -0.59
SENP3-209ENST00000610454 BEX2Q9BXY8 128 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 NMNAT2Q9BZQ4 307 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 OR51V1Q9H2C8 321 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 WDR76Q9H967 626 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 PAPOLBQ9NRJ5 636 aaKnown RBP11.39□□□□□ -0.59
SENP3-209ENST00000610454 CENPMQ9NSP4 180 aa11.39□□□□□ -0.59
SENP3-209ENST00000610454 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 ZNF878C9JN71 531 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 ZNF593O00488 134 aaPredicted RBP11.38□□□□□ -0.59
SENP3-209ENST00000610454 IFNA2P01563 188 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 CD55P08174 381 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 PCMT1P22061 227 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 FASP25445 335 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 GSTT1P30711 240 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 SLC15A1P46059 708 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 CDH15P55291 814 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 MVKQ03426 396 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 CDK5R2Q13319 367 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 TMEM255AQ5JRV8 349 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 OR2T2Q6IF00 324 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 LYPD4Q6UWN0 246 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 MRPL21Q7Z2W9 205 aaKnown RBP11.38□□□□□ -0.59
SENP3-209ENST00000610454 ERI1Q8IV48 349 aaKnown RBP11.38□□□□□ -0.59
SENP3-209ENST00000610454 OR6N2Q8NGY6 317 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 OR5K1Q8NHB7 308 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 CLDND2Q8NHS1 167 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 SLAMF6Q96DU3 332 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 MAP6Q96JE9 813 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 INTS14Q96SY0 518 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 C1QTNF5Q9BXJ0 243 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 PRRG3Q9BZD7 231 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 MED20Q9H944 212 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 DDX28Q9NUL7 540 aaKnown RBP11.38□□□□□ -0.59
SENP3-209ENST00000610454 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 AP4S1Q9Y587 144 aa11.38□□□□□ -0.59
SENP3-209ENST00000610454 TANC2Q9HCD6 1990 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 ISPDA4D126 451 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 B4DSR2 109 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 G3V2T6 193 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 GLCEO94923 617 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 HSD11B1P28845 292 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 IL2RGP31785 369 aa11.37□□□□□ -0.59
SENP3-209ENST00000610454 RPS7P62081 194 aaKnown RBP11.37□□□□□ -0.59
SENP3-209ENST00000610454 GRB2P62993 217 aaKnown RBP11.37□□□□□ -0.59
SENP3-209ENST00000610454 EIF2B1Q14232 305 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms