RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CYP4Z1Q86W10 505 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 GJC3Q8NFK1 279 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 OR52E2Q8NGJ4 325 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 OR5L1Q8NGL2 311 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 RAB40AQ8WXH6 277 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 TAF15Q92804 592 aaKnown RBP eCLIP15.04■□□□□ -0
CHMP2A-208ENST00000601220 ZNF582Q96NG8 517 aaPredicted RBP15.04■□□□□ -0
CHMP2A-208ENST00000601220 TMEM246Q9BRR3 403 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 NDEL1Q9GZM8 345 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 ARGLU1Q9NWB6 273 aaPredicted RBP15.04■□□□□ -0
CHMP2A-208ENST00000601220 ABCD2Q9UBJ2 740 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 B9D1Q9UPM9 204 aa15.04■□□□□ -0
CHMP2A-208ENST00000601220 IGHV3OR16-10A0A075B7F0 116 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 IGHV2-70DA0A0C4DH43 119 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 IGHV3-64DA0A0J9YX35 117 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 KIR2DS1A0A191URI9 304 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 UNC119BA6NIH7 251 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 F5H5P2 479 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 SELEP16581 610 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 RHCEP18577 417 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 SRP9P49458 86 aaKnown RBP15.03■□□□□ -0
CHMP2A-208ENST00000601220 MAB21L1Q13394 359 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 ZNF404Q494X3 552 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 LEG1Q6P5S2 330 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 CORO6Q6QEF8 472 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 LRRN1Q6UXK5 716 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 MOGAT3Q86VF5 341 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 JAZF1Q86VZ6 243 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 OR6V1Q8N148 313 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 PARP8Q8N3A8 854 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 FAM86B1Q8N7N1 296 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 FAM162AQ96A26 154 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 MS4A7Q9GZW8 240 aaPredicted RBP15.03■□□□□ -0
CHMP2A-208ENST00000601220 HDHD2Q9H0R4 259 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 WDR76Q9H967 626 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 UNKLQ9H9P5 680 aaKnown RBP15.03■□□□□ -0
CHMP2A-208ENST00000601220 EFCAB1Q9HAE3 211 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 MIOXQ9UGB7 285 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 CMYA5Q8N3K9 4069 aa15.03■□□□□ -0
CHMP2A-208ENST00000601220 DIRAS1O95057 198 aa15.02■□□□□ -0
CHMP2A-208ENST00000601220 PPP1R3DO95685 299 aa15.02■□□□□ -0
CHMP2A-208ENST00000601220 RPS2P15880 293 aaKnown RBP15.02■□□□□ -0
CHMP2A-208ENST00000601220 GATA4P43694 442 aa15.02■□□□□ -0
CHMP2A-208ENST00000601220 ZNF841Q6ZN19 808 aa15.02■□□□□ -0
CHMP2A-208ENST00000601220 SLC26A10Q8NG04 563 aa15.02■□□□□ -0
CHMP2A-208ENST00000601220 PRDM13Q9H4Q3 707 aa15.02■□□□□ -0
CHMP2A-208ENST00000601220 DCAF13Q9NV06 445 aaKnown RBP15.02■□□□□ -0
CHMP2A-208ENST00000601220 RPS6KA6Q9UK32 745 aa15.02■□□□□ -0
CHMP2A-208ENST00000601220 ARPC3O15145 178 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 HLA-DPB1P04440 258 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 ACSM4P0C7M7 580 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 CRABP1P29762 137 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 RPS6KA3P51812 740 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 RAD23AP54725 363 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 PRSS12P56730 875 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 RFX4Q33E94 735 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 FGD3Q5JSP0 725 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 SLC18B1Q6NT16 456 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 PGM2L1Q6PCE3 622 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 SMARCD3Q6STE5 483 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 LYPD2Q6UXB3 125 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 CFAP77Q6ZQR2 320 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 NAA40Q86UY6 237 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 BHLHE23Q8NDY6 225 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 Q8TCH9 128 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 SLC25A28Q96A46 364 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 NEIL1Q96FI4 390 aaPredicted RBP15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 KCTD14Q9BQ13 255 aaPredicted RBP15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 SRA1Q9HD15 236 aaKnown RBP15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 PNRC2Q9NPJ4 139 aaKnown RBP15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 TMEM100Q9NV29 134 aa15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 FAM32AQ9Y421 112 aaKnown RBP15.01□□□□□ -0.01
CHMP2A-208ENST00000601220 POM121CA8CG34 1229 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 SEMG1P04279 462 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 GGT2P36268 569 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 MDH1P40925 334 aaKnown RBP15□□□□□ -0.01
CHMP2A-208ENST00000601220 MTNR1AP48039 350 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 PSME3P61289 254 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 GNB2P62879 340 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 IL13RA1P78552 427 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 GK2Q14410 553 aaPredicted RBP15□□□□□ -0.01
CHMP2A-208ENST00000601220 CLEC12AQ5QGZ9 265 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 GLYATQ6IB77 296 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 BTNL3Q6UXE8 466 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 ZSCAN2Q7Z7L9 614 aaPredicted RBP15□□□□□ -0.01
CHMP2A-208ENST00000601220 ZBTB46Q86UZ6 589 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 FITM2Q8N6M3 262 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 CELF2-AS1Q8N7Q2 184 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 OR52J3Q8NH60 311 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 ERMAPQ96PL5 475 aaPredicted RBP15□□□□□ -0.01
CHMP2A-208ENST00000601220 NMNAT3Q96T66 252 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 ZNF446Q9NWS9 450 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 CYB5R1Q9UHQ9 305 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 AURKCQ9UQB9 309 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 POLR1DQ9Y2S0 133 aa15□□□□□ -0.01
CHMP2A-208ENST00000601220 MDFIC2A0A1B0GVS7 189 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 NDUFAB1O14561 156 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 CCDC22O60826 627 aa14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 HIST1H1CP16403 213 aaKnown RBP14.99□□□□□ -0.01
CHMP2A-208ENST00000601220 FPR3P25089 353 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms