RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ENTPD1P49961 510 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 ERFP50548 548 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 CRISP1P54107 249 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 SELENOVP59797 346 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 ESRRGP62508 458 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 PTGES3Q15185 160 aaKnown RBP7.46□□□□□ -1.22
SSBP4-208ENST00000600628 CARTPTQ16568 116 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 SPRNQ5BIV9 151 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 C1orf146Q5VVC0 180 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 CYB5R2Q6BCY4 276 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 ARL9Q6T311 187 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 ZNF771Q7L3S4 317 aaPredicted RBP7.46□□□□□ -1.22
SSBP4-208ENST00000600628 NAA40Q86UY6 237 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 HIPK1Q86Z02 1210 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 LINC00346Q8IVM7 164 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 PROKR2Q8NFJ6 384 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 OR51L1Q8NGJ5 315 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 OR9Q1Q8NGQ5 310 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 RNF133Q8WVZ7 376 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 LRTOMTQ8WZ04 291 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 HPS1Q92902 700 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 SPSB4Q96A44 273 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 CENPNQ96H22 339 aaPredicted RBP7.46□□□□□ -1.22
SSBP4-208ENST00000600628 COG8Q96MW5 612 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 SOX7Q9BT81 388 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 OSBPL10Q9BXB5 764 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 OR51B6Q9H340 312 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 RERGLQ9H628 205 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 MED20Q9H944 212 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 CHODLQ9H9P2 273 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 CYSLTR2Q9NS75 346 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 PURGQ9UJV8 347 aaKnown RBP7.46□□□□□ -1.22
SSBP4-208ENST00000600628 ZDHHC8Q9ULC8 765 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 GRIP1Q9Y3R0 1128 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 ANK2Q01484 3957 aa7.46□□□□□ -1.22
SSBP4-208ENST00000600628 DOCK11Q5JSL3 2073 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 A0A1W2PPW3 197 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 C5orf63A6NC05 138 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 CCDC182A6NF36 153 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 TVP23AA6NH52 213 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 FAM183AA6NL82 134 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 A8MV72 311 aaPredicted RBP7.45□□□□□ -1.22
SSBP4-208ENST00000600628 IQCF6A8MYZ5 107 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 ZNF593O00488 134 aaPredicted RBP7.45□□□□□ -1.22
SSBP4-208ENST00000600628 GNGT2O14610 69 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 E2F6O75461 281 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 FSTL3O95633 263 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 FCGR1AP12314 374 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 FASP25445 335 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 GCH1P30793 250 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 OPRL1P41146 370 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 ARHGDIAP52565 204 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 LMO4P61968 165 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 CCL8P80075 99 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 GGTLC2Q14390 218 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 HLXQ14774 488 aaPredicted RBP7.45□□□□□ -1.22
SSBP4-208ENST00000600628 NKPD1Q17RQ9 610 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 SLC35D3Q5M8T2 416 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 C6orf52Q5T4I8 152 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 SLX4IPQ5VYV7 408 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 TMEM236Q5W0B7 351 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 C12orf73Q69YU5 71 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 KRT74Q7RTS7 529 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 DCXRQ7Z4W1 244 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 AMIGO2Q86SJ2 522 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 PRIMA1Q86XR5 153 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 CPOQ8IVL8 374 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 CMBLQ96DG6 245 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 MSI2Q96DH6 328 aaKnown RBP7.45□□□□□ -1.22
SSBP4-208ENST00000600628 DIRC2Q96SL1 478 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 AMELYQ99218 206 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 PITX2Q99697 317 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 SLC30A2Q9BRI3 323 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 REPIN1Q9BWE0 567 aaKnown RBP7.45□□□□□ -1.22
SSBP4-208ENST00000600628 GABARAPL3Q9BY60 117 aa7.45□□□□□ -1.22
SSBP4-208ENST00000600628 PAPOLBQ9NRJ5 636 aaKnown RBP7.45□□□□□ -1.22
SSBP4-208ENST00000600628 ZNF275Q9NSD4 429 aaPredicted RBP7.45□□□□□ -1.22
SSBP4-208ENST00000600628 ARHGAP32A7KAX9 2087 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 G3V2T6 193 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 H3BN98 237 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 M0R135 149 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 WNT9BO14905 357 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 MLNRO43193 412 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 MITFO75030 526 aaPredicted RBP7.44□□□□□ -1.22
SSBP4-208ENST00000600628 ALPLP05186 524 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 ZNF823P16415 610 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 GSTT1P30711 240 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 IL2RGP31785 369 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 GATA4P43694 442 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 GZMKP49863 264 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 ZNF81P51508 661 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 GK2Q14410 553 aaPredicted RBP7.44□□□□□ -1.22
SSBP4-208ENST00000600628 TRIP10Q15642 601 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 SNAI3Q3KNW1 292 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 AADACL4Q5VUY2 407 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 TMEM154Q6P9G4 183 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 DRAM2Q6UX65 266 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 CCDC121Q6ZUS5 278 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 DPY19L4Q7Z388 723 aa7.44□□□□□ -1.22
SSBP4-208ENST00000600628 ZDHHC13Q8IUH4 622 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms