RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CDRT15Q96T59 188 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 PITX2Q99697 317 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 COQ7Q99807 217 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 RBM4Q9BWF3 364 aaKnown RBP14.31□□□□□ -0.12
CCDC9-202ENST00000595659 C1QTNF5Q9BXJ0 243 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 HDHD2Q9H0R4 259 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 AUP1Q9Y679 476 aa14.31□□□□□ -0.12
CCDC9-202ENST00000595659 MLNRO43193 412 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 FPR3P25089 353 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 NOS3P29474 1203 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 RRM2P31350 389 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 MDH2P40926 338 aaKnown RBP14.3□□□□□ -0.12
CCDC9-202ENST00000595659 COX10Q12887 443 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 ARMCX4Q5H9R4 360 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 CLEC12AQ5QGZ9 265 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 SLC18B1Q6NT16 456 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 SLC27A4Q6P1M0 643 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 BCL6BQ8N143 479 aaPredicted RBP14.3□□□□□ -0.12
CCDC9-202ENST00000595659 OR52E2Q8NGJ4 325 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 DVL3Q92997 716 aaPredicted RBP14.3□□□□□ -0.12
CCDC9-202ENST00000595659 NSMCE2Q96MF7 247 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 CDADC1Q9BWV3 514 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 ARL8BQ9NVJ2 186 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 ZNF69Q9UC07 566 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 MAGEL2Q9UJ55 1249 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 INSIG2Q9Y5U4 225 aa14.3□□□□□ -0.12
CCDC9-202ENST00000595659 NBEAL1Q6ZS30 2694 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 PPIAL4EA0A075B759 164 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 IGHV3OR16-10A0A075B7F0 116 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 PPIAL4CA0A0B4J2A2 164 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 F5H0A9 414 aaPredicted RBP14.29□□□□□ -0.12
CCDC9-202ENST00000595659 PPIAL4DF5H284 164 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 ARPC2O15144 300 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 ARPC3O15145 178 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 LCATP04180 440 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 FABP3P05413 133 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 ACSM4P0C7M7 580 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 PPIAL4FP0DN26 164 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 HSD17B1P14061 328 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 ZNF12P17014 697 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 PYCR1P32322 319 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 PMELP40967 661 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 RPS27P42677 84 aaKnown RBP14.29□□□□□ -0.12
CCDC9-202ENST00000595659 SRP9P49458 86 aaKnown RBP14.29□□□□□ -0.12
CCDC9-202ENST00000595659 GYS2P54840 703 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 ESCO2Q56NI9 601 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 KLF17Q5JT82 389 aaPredicted RBP14.29□□□□□ -0.12
CCDC9-202ENST00000595659 SAMD4BQ5PRF9 694 aaKnown RBP14.29□□□□□ -0.12
CCDC9-202ENST00000595659 PGM2L1Q6PCE3 622 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 CPLX4Q7Z7G2 160 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 OR2AJ1Q8NGZ0 328 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 SLC30A2Q9BRI3 323 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 NSRP1Q9H0G5 558 aaKnown RBP14.29□□□□□ -0.12
CCDC9-202ENST00000595659 EGLN3Q9H6Z9 239 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 TMEM165Q9HC07 324 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 DDX28Q9NUL7 540 aaKnown RBP14.29□□□□□ -0.12
CCDC9-202ENST00000595659 TMEM100Q9NV29 134 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 CD300AQ9UGN4 299 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 ATPIF1Q9UII2 106 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 TMCC3Q9ULS5 477 aa14.29□□□□□ -0.12
CCDC9-202ENST00000595659 SOX21Q9Y651 276 aaPredicted RBP14.29□□□□□ -0.12
CCDC9-202ENST00000595659 J3QW42 95 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 WNT2P09544 360 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 GGT2P36268 569 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 GSSP48637 474 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 COMPP49747 757 aaPredicted RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 UBA52P62987 128 aaKnown RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 HOXA4Q00056 320 aaPredicted RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 GK2Q14410 553 aaPredicted RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 PGBD2Q6P3X8 592 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 RBMS3Q6XE24 437 aaKnown RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 ZBTB46Q86UZ6 589 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 PGAM4Q8N0Y7 254 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 CYB561A3Q8NBI2 242 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 C19orf18Q8NEA5 215 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 GNPDA2Q8TDQ7 276 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 POP5Q969H6 163 aaKnown RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 SLCO4A1Q96BD0 722 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 MRI1Q9BV20 369 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 HCAR1Q9BXC0 346 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 PNRC2Q9NPJ4 139 aaKnown RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 MRPL22Q9NWU5 206 aaKnown RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 OR5V1Q9UGF6 321 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 NUP50Q9UKX7 468 aa14.28□□□□□ -0.12
CCDC9-202ENST00000595659 POLR3KQ9Y2Y1 108 aaPredicted RBP14.28□□□□□ -0.12
CCDC9-202ENST00000595659 TVP23AA6NH52 213 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 IQCF6A8MYZ5 107 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 RPS2P15880 293 aaKnown RBP14.27□□□□□ -0.13
CCDC9-202ENST00000595659 CD80P33681 288 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 IFNGR2P38484 337 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 TRAP1Q12931 704 aaKnown RBP14.27□□□□□ -0.13
CCDC9-202ENST00000595659 TSPAN31Q12999 210 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 KRTAP27-1Q3LI81 207 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 SLC36A3Q495N2 470 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 LYPD4Q6UWN0 246 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 ZNF620Q6ZNG0 422 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 COLCA1Q6ZS62 124 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 ZDHHC21Q8IVQ6 265 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 DEFB107AQ8IZN7 70 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms