RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GMFGO60234 142 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 CD8AP01732 235 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 HIST1H1CP16403 213 aaKnown RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 RPL4P36578 427 aaKnown RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 ZNF117Q03924 483 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 IL11RAQ14626 422 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 PLEKHN1Q494U1 663 aaPredicted RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 GXYLT1Q4G148 440 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 DNLZQ5SXM8 178 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 WBP2NLQ6ICG8 309 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 OR52W1Q6IF63 320 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 MARCH3Q86UD3 253 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 MUC20Q8N307 709 aaPredicted RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 OR5W2Q8NH69 310 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 FCAMRQ8WWV6 532 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 METTL21AQ8WXB1 218 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 SMPDL3BQ92485 455 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 MARS2Q96GW9 593 aaKnown RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 MMP26Q9NRE1 261 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 METTL21EPA6NDL7 271 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 ELOA3DA6NLF2 546 aaPredicted RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 TCAPO15273 167 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 MT-ND5P03915 603 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 GRK6P43250 576 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 MRPS10P82664 201 aaKnown RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 TRA2AQ13595 282 aaKnown RBP eCLIP13.78□□□□□ -0.2
PNKP-204ENST00000594661 ZNF239Q16600 458 aaKnown RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 ELOA3BQ3SY89 546 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 NKAPLQ5M9Q1 402 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 PAPD4Q6PIY7 484 aaKnown RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 IL34Q6ZMJ4 242 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 ATG4DQ86TL0 474 aaPredicted RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 AGBL5Q8NDL9 886 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 C17orf47Q8NEP4 570 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 ELOA3Q8NG57 546 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 THAP3Q8WTV1 239 aaPredicted RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 C8orf44Q96CB5 159 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 NRIP2Q9BQI9 281 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 ZNF471Q9BX82 626 aaPredicted RBP13.78□□□□□ -0.2
PNKP-204ENST00000594661 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 RXFP3Q9NSD7 469 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 GFOD1Q9NXC2 390 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 ADAM18Q9Y3Q7 739 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 PCDHGA1Q9Y5H4 931 aa13.78□□□□□ -0.2
PNKP-204ENST00000594661 MPDZO75970 2070 aa13.77□□□□□ -0.2
PNKP-204ENST00000594661 ZNF354AO60765 605 aaPredicted RBP13.77□□□□□ -0.21
PNKP-204ENST00000594661 ANXA2P07355 339 aaKnown RBP13.77□□□□□ -0.21
PNKP-204ENST00000594661 SLC25A4P12235 298 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 TSPAN7P41732 249 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 HGFACQ04756 655 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 TMEM244Q5VVB8 128 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 MRPL14Q6P1L8 145 aaKnown RBP13.77□□□□□ -0.21
PNKP-204ENST00000594661 FAM199XQ6PEV8 388 aaPredicted RBP13.77□□□□□ -0.21
PNKP-204ENST00000594661 RAB3CQ96E17 227 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 MALSU1Q96EH3 234 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 CLCC1Q96S66 551 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 SOX7Q9BT81 388 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 LAT2Q9GZY6 243 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 SLC26A1Q9H2B4 701 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 HAO2Q9NYQ3 351 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 KLK11Q9UBX7 282 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 TP53TG5Q9Y2B4 290 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 ZNF337Q9Y3M9 751 aa13.77□□□□□ -0.21
PNKP-204ENST00000594661 LNP1A1A4G5 178 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ALG1L2C9J202 215 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 J3QLW9 94 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 HCRTR2O43614 444 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ZNF19P17023 458 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 AVPR2P30518 371 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ZNF85Q03923 595 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 POU4F2Q12837 409 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 GLT8D1Q68CQ7 371 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ARL9Q6T311 187 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ANGPTL5Q86XS5 388 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 OR51L1Q8NGJ5 315 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 LGALS14Q8TCE9 139 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 GCDHQ92947 438 aaPredicted RBP13.76□□□□□ -0.21
PNKP-204ENST00000594661 ZMYND19Q96E35 227 aaPredicted RBP13.76□□□□□ -0.21
PNKP-204ENST00000594661 C4orf36Q96KX1 117 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 TBL1XR1Q9BZK7 514 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 SEC61A2Q9H9S3 476 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 GPR179Q6PRD1 2367 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 A0A1W2PQD3 144 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 CD2P06729 351 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 PNMTP11086 282 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 SLC2A1P11166 492 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 HIST1H1BP16401 226 aaKnown RBP13.76□□□□□ -0.21
PNKP-204ENST00000594661 ACP1P24666 158 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ACTC1P68032 377 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ACTA1P68133 377 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 SRSF4Q08170 494 aaKnown RBP13.76□□□□□ -0.21
PNKP-204ENST00000594661 TOMM34Q15785 309 aaPredicted RBP13.76□□□□□ -0.21
PNKP-204ENST00000594661 GFOD2Q3B7J2 385 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 ALKBH2Q6NS38 261 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 FAAP20Q6NZ36 180 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 DPY19L2P2Q6ZN68 376 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 CPEB2Q7Z5Q1 589 aaKnown RBP13.76□□□□□ -0.21
PNKP-204ENST00000594661 C10orf53Q8N6V4 93 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 RHBDD1Q8TEB9 315 aa13.76□□□□□ -0.21
PNKP-204ENST00000594661 SNX33Q8WV41 574 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms