RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 POM121L2Q96KW2 1035 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 OR8B4Q96RC9 309 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 CCL19Q99731 98 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 FOXC2Q99958 501 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 SOX7Q9BT81 388 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 ALG8Q9BVK2 526 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 YIPF3Q9GZM5 350 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 KCNN2Q9H2S1 579 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 C1orf198Q9H425 327 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 DUSP21Q9H596 190 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 ELOVL3Q9HB03 270 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 BRD7Q9NPI1 651 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 PLCXD1Q9NUJ7 323 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 MRPS18AQ9NVS2 196 aaKnown RBP8.33□□□□□ -1.08
DDX39A-220ENST00000593008 ERVK13-1Q9NX77 482 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 LRCH1Q9Y2L9 728 aa8.33□□□□□ -1.08
DDX39A-220ENST00000593008 ROS1P08922 2347 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 ITPR3Q14573 2671 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 DAPL1A0PJW8 107 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 EFCAB10A6NFE3 127 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 VSTM5A8MXK1 200 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 ABCD4O14678 606 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 SERPINA5P05154 406 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 LCKP06239 509 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 CDK1P06493 297 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 CD3EP07766 207 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 ACSM4P0C7M7 580 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 SMIM18P0DKX4 95 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 CD40P25942 277 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 STOMP27105 288 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 CX3CR1P49238 355 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 GTF2A1P52655 376 aaPredicted RBP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 BLVRAP53004 296 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 NANOS3P60323 173 aaKnown RBP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 NAAAQ02083 359 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 HNRNPA0Q13151 305 aaKnown RBP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 TMED1Q13445 227 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 IRF3Q14653 427 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 SNAI3Q3KNW1 292 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 NCMAPQ5T1S8 102 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 SPNS3Q6ZMD2 512 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 DPPA2Q7Z7J5 298 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 GJC3Q8NFK1 279 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 SPRYD4Q8WW59 207 aaPredicted RBP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 AKAP1Q92667 903 aaKnown RBP eCLIP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 MBD6Q96DN6 1003 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 TMEM80Q96HE8 168 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 C4orf36Q96KX1 117 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 OR5M11Q96RB7 305 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 ATF6BQ99941 703 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 WACQ9BTA9 647 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 CCDC90BQ9GZT6 254 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 HDHD2Q9H0R4 259 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 ESRP2Q9H6T0 727 aaKnown RBP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 OBP2BQ9NPH6 170 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 DDX28Q9NUL7 540 aaKnown RBP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF319Q9P2F9 582 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 GNG8Q9UK08 70 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 FZR1Q9UM11 496 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 DIMT1Q9UNQ2 313 aaKnown RBP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 RNF115Q9Y4L5 304 aa8.32□□□□□ -1.08
DDX39A-220ENST00000593008 SIRT4Q9Y6E7 314 aaPredicted RBP8.32□□□□□ -1.08
DDX39A-220ENST00000593008 PNMA8CA0A1B0GUJ8 204 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF878C9JN71 531 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 J3QLW9 94 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 RGS10O43665 173 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 SMPD2O60906 423 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 SRSF10O75494 262 aaKnown RBP8.31□□□□□ -1.08
DDX39A-220ENST00000593008 H2BFMP0C1H6 154 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 CCDC159P0C7I6 412 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 OR2T7P0C7T2 308 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF35P13682 527 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF19P17023 458 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 EEF1B2P24534 225 aaKnown RBP8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ARR3P36575 388 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 KIR3DL2P43630 455 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 GDI2P50395 445 aaKnown RBP8.31□□□□□ -1.08
DDX39A-220ENST00000593008 CHN2P52757 468 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 RIPPLY3P57055 190 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF121P58317 390 aaPredicted RBP8.31□□□□□ -1.08
DDX39A-220ENST00000593008 PCBD1P61457 104 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ACTC1P68032 377 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ACTA1P68133 377 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ROM1Q03395 351 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 POU4F2Q12837 409 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ODF4Q2M2E3 257 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 GFOD2Q3B7J2 385 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 CDONQ4KMG0 1287 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 KLHL22Q53GT1 634 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 VHLLQ6RSH7 139 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 PRSS45Q7RTY3 260 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 KRT77Q7Z794 578 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 SYT9Q86SS6 491 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 KLBQ86Z14 1044 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 PIAS4Q8N2W9 510 aaPredicted RBP8.31□□□□□ -1.08
DDX39A-220ENST00000593008 PRSS35Q8N3Z0 413 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 STX19Q8N4C7 294 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 ACBD7Q8N6N7 88 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 YIPF7Q8N8F6 280 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms