RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KIR2DL3P43628 341 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 TGM4P49221 684 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 OR12D2P58182 307 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 ROM1Q03395 351 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 TRAM1Q15629 374 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 SSX1Q16384 188 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 DEFB113Q30KQ7 82 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 NRN1LQ496H8 165 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 TIMM23BQ5SRD1 257 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 DEGS2Q6QHC5 323 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 SLC16A12Q6ZSM3 486 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 RHOUQ7L0Q8 258 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 SSX6Q7RTT6 188 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 LINC01560Q8TB33 94 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 SMAP2Q8WU79 429 aaPredicted RBP10.37□□□□□ -0.75
DDX39A-219ENST00000592927 THEM6Q8WUY1 208 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 C11orf40Q8WZ69 217 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 HSD17B8Q92506 261 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 C12orf43Q96C57 262 aaKnown RBP10.37□□□□□ -0.75
DDX39A-219ENST00000592927 WFIKKN1Q96NZ8 548 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 COQ7Q99807 217 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 FOXB1Q99853 325 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 WACQ9BTA9 647 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 CLEC4MQ9H2X3 399 aaPredicted RBP10.37□□□□□ -0.75
DDX39A-219ENST00000592927 SEC61A2Q9H9S3 476 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 SLC24A3Q9HC58 644 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 POLE4Q9NR33 117 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 CYB5R1Q9UHQ9 305 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 UGT2A1Q9Y4X1 527 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 A0A096LPE4 126 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 A0A1W2PPZ6 126 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 OR5H1A6NKK0 313 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 CASKO14936 926 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 OGG1O15527 345 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 PLPP2O43688 288 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 AIREO43918 545 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 ZNF254O75437 659 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 LALBAP00709 142 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 MSR1P21757 451 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 GALP22466 123 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 GABRA5P31644 462 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 MRPS34P82930 218 aaKnown RBP10.36□□□□□ -0.75
DDX39A-219ENST00000592927 EIF2B1Q14232 305 aaKnown RBP10.36□□□□□ -0.75
DDX39A-219ENST00000592927 CTF1Q16619 201 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 MEP1BQ16820 701 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 CNPY1Q3B7I2 92 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 TP53I3Q53FA7 332 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 HIKESHIQ53FT3 197 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 LIPKQ5VXJ0 399 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 RPL22L1Q6P5R6 122 aaKnown RBP10.36□□□□□ -0.75
DDX39A-219ENST00000592927 KLHL24Q6TFL4 600 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 ZNF813Q6ZN06 617 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 ZNF679Q8IYX0 411 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 C17orf78Q8N4C9 275 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 RFLNBQ8N5W9 214 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 OR52N5Q8NH56 324 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 BCL2L2Q92843 193 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-219ENST00000592927 MUCL1Q96DR8 90 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 PELI1Q96FA3 418 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 ZC3HAV1LQ96H79 300 aaKnown RBP10.36□□□□□ -0.75
DDX39A-219ENST00000592927 DACH2Q96NX9 599 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 FOXN4Q96NZ1 517 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 OR8B4Q96RC9 309 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 ABHD6Q9BV23 337 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 MROQ9BYG7 248 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 C1orf198Q9H425 327 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 TMEM38BQ9NVV0 291 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 GNG8Q9UK08 70 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 STUB1Q9UNE7 303 aa10.36□□□□□ -0.75
DDX39A-219ENST00000592927 MPZL1O95297 269 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 FARS2O95363 451 aaKnown RBP10.35□□□□□ -0.75
DDX39A-219ENST00000592927 OR8G3PP0DMU2 310 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 HOXB1P14653 301 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-219ENST00000592927 B4GALT1P15291 398 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 CELP19835 753 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 GADD45AP24522 165 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 DCTDP32321 178 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 RIDAP52758 137 aaKnown RBP10.35□□□□□ -0.75
DDX39A-219ENST00000592927 UBE2NP61088 152 aaKnown RBP10.35□□□□□ -0.75
DDX39A-219ENST00000592927 DOC2BQ14184 412 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 CDK5R1Q15078 307 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 PPA1Q15181 289 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 TAB1Q15750 504 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 TBRG1Q3YBR2 411 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 FAM27BQ5VT28 67 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 DMKNQ6E0U4 476 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-219ENST00000592927 ALKBH2Q6NS38 261 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 ZNF544Q6NX49 715 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 ZNF627Q7L945 461 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 SSX8Q7RTT4 187 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-219ENST00000592927 KRTAP1-3Q8IUG1 177 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 CCDC36Q8IYA8 594 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 CIARTQ8N365 385 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-219ENST00000592927 SLC22A24Q8N4F4 322 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 YIPF7Q8N8F6 280 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 OR2AJ1Q8NGZ0 328 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 RPS4Y2Q8TD47 263 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 ST7LQ8TDW4 575 aa10.35□□□□□ -0.75
DDX39A-219ENST00000592927 FAM222BQ8WU58 562 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms