RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ZAR1LA6NP61 321 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 C17orf100A8MU93 164 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 SPRY3O43610 288 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 CDC14BO60729 498 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 SLC2A1P11166 492 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 IGFBP5P24593 272 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 GCH1P30793 250 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 NAA10P41227 235 aaPredicted RBP9.82□□□□□ -0.84
VMP1-211ENST00000591315 PDLIM4P50479 330 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 PRKXP51817 358 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 ESRRGP62508 458 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 CCL8P80075 99 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 APOFQ13790 326 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 SLX4IPQ5VYV7 408 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 MBNL2Q5VZF2 373 aaKnown RBP9.82□□□□□ -0.84
VMP1-211ENST00000591315 Q6ZR03 302 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 CXXC5Q7LFL8 322 aaKnown RBP9.82□□□□□ -0.84
VMP1-211ENST00000591315 TIGD4Q8IY51 512 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 OR5AS1Q8N127 324 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 TCEANCQ8N8B7 351 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 OR6N2Q8NGY6 317 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 UBASH3BQ8TF42 649 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 NEU4Q8WWR8 484 aaPredicted RBP9.82□□□□□ -0.84
VMP1-211ENST00000591315 SLAMF6Q96DU3 332 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 PLEKHA8Q96JA3 519 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 IL4I1Q96RQ9 567 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 ATF6BQ99941 703 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 OSBPL10Q9BXB5 764 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 RIBC2Q9H4K1 309 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 TREM2Q9NZC2 230 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 N6AMT1Q9Y5N5 214 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 CACNG2Q9Y698 323 aa9.82□□□□□ -0.84
VMP1-211ENST00000591315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.82□□□□□ -0.841e-5■■■■□ 21.5
VMP1-211ENST00000591315 IGHV4-61A0A0C4DH41 118 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 VWC2LB2RUY7 222 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 EI24O14681 340 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 TLX2O43763 284 aaPredicted RBP9.81□□□□□ -0.84
VMP1-211ENST00000591315 TIMM8AO60220 97 aaPredicted RBP9.81□□□□□ -0.84
VMP1-211ENST00000591315 IGHV1-46P01743 117 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 LCATP04180 440 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 MRPL3P09001 348 aaKnown RBP9.81□□□□□ -0.84
VMP1-211ENST00000591315 PAICSP22234 425 aaKnown RBP9.81□□□□□ -0.84
VMP1-211ENST00000591315 SELENOVP59797 346 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 EFNB1P98172 346 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 EIF2B1Q14232 305 aaKnown RBP9.81□□□□□ -0.84
VMP1-211ENST00000591315 GGTLC2Q14390 218 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 TRIP10Q15642 601 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 SNAI3Q3KNW1 292 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 ZIK1Q3SY52 487 aaPredicted RBP9.81□□□□□ -0.84
VMP1-211ENST00000591315 TEX30Q5JUR7 227 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 C12orf73Q69YU5 71 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 OR2T2Q6IF00 324 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 CLEC9AQ6UXN8 241 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 COLCA1Q6ZS62 124 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 BIVMQ86UB2 503 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 DNAJC9Q8WXX5 260 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 UBE2FQ969M7 185 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 INTS14Q96SY0 518 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 SLC29A1Q99808 456 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 ABHD6Q9BV23 337 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 BPESC1Q9GZL8 116 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 MS4A5Q9H3V2 200 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 MARCH7Q9H992 704 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 DDX28Q9NUL7 540 aaKnown RBP9.81□□□□□ -0.84
VMP1-211ENST00000591315 SLCO1C1Q9NYB5 712 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 ATPIF1Q9UII2 106 aa9.81□□□□□ -0.84
VMP1-211ENST00000591315 PURGQ9UJV8 347 aaKnown RBP9.81□□□□□ -0.84
VMP1-211ENST00000591315 DYSFO75923 2080 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 PRR32B1ATL7 298 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 M0R135 149 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 WNT9BO14905 357 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 BAG2O95816 211 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 ALPLP05186 524 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 NR4A2P43354 598 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 ZNF81P51508 661 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 DSCR9P59020 149 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 RPS7P62081 194 aaKnown RBP9.8□□□□□ -0.84
VMP1-211ENST00000591315 ECH1Q13011 328 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 ZFP1Q6P2D0 407 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 ARL9Q6T311 187 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 ZNF786Q8N393 782 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 CBR4Q8N4T8 237 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 OR2AE1Q8NHA4 323 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 SNX33Q8WV41 574 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 APOBEC3DQ96AK3 386 aaPredicted RBP9.8□□□□□ -0.84
VMP1-211ENST00000591315 HAVCR1Q96D42 359 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 ZNF799Q96GE5 643 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 RAB3IPQ96QF0 476 aaPredicted RBP9.8□□□□□ -0.84
VMP1-211ENST00000591315 DCLRE1CQ96SD1 692 aaKnown RBP9.8□□□□□ -0.84
VMP1-211ENST00000591315 COPS4Q9BT78 406 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 C1QTNF5Q9BXJ0 243 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 GABARAPL3Q9BY60 117 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 TTTY10Q9BZA0 68 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 DCAF16Q9NXF7 216 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 AASSQ9UDR5 926 aa9.8□□□□□ -0.84
VMP1-211ENST00000591315 ARHGAP32A7KAX9 2087 aa9.79□□□□□ -0.84
VMP1-211ENST00000591315 WNK2Q9Y3S1 2297 aa9.79□□□□□ -0.84
VMP1-211ENST00000591315 IGHV3-64DA0A0J9YX35 117 aa9.79□□□□□ -0.84
VMP1-211ENST00000591315 LOC390937A0A1W2PQ73 354 aa9.79□□□□□ -0.84
VMP1-211ENST00000591315 LRP5LA4QPB2 252 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms