RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TACSTD2P09758 323 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 ACSM4P0C7M7 580 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 FAM157BP0CG42 384 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 NR4A1P22736 598 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 CRHBPP24387 322 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 EEF1B2P24534 225 aaKnown RBP11.77□□□□□ -0.53
VMP1-210ENST00000589823 SSTR2P30874 369 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 OTX1P32242 354 aaPredicted RBP11.77□□□□□ -0.53
VMP1-210ENST00000589823 WNT5AP41221 380 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 CX3CR1P49238 355 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 UCP2P55851 309 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 RPS23P62266 143 aaKnown RBP11.77□□□□□ -0.53
VMP1-210ENST00000589823 TLE4Q04727 773 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 HGFACQ04756 655 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 SNTB2Q13425 540 aaKnown RBP11.77□□□□□ -0.53
VMP1-210ENST00000589823 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
VMP1-210ENST00000589823 ZNF829Q3KNS6 432 aaPredicted RBP11.77□□□□□ -0.53
VMP1-210ENST00000589823 ZNF672Q499Z4 452 aaPredicted RBP11.77□□□□□ -0.53
VMP1-210ENST00000589823 KCTD20Q7Z5Y7 419 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 TMEM200AQ86VY9 491 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 C1orf174Q8IYL3 243 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 YIPF7Q8N8F6 280 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 C14orf79Q96F83 325 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 COG8Q96MW5 612 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 DOK1Q99704 481 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 JAM3Q9BX67 310 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 OR51B6Q9H340 312 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 TBCCD1Q9NVR7 557 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 FKBP14Q9NWM8 211 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 ERVK13-1Q9NX77 482 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 GNG8Q9UK08 70 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 PRR14LQ5THK1 2151 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 FAM221AA4D161 298 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 J3QLW9 94 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 J3QW42 95 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 MAGEB4O15481 346 aaPredicted RBP11.76□□□□□ -0.53
VMP1-210ENST00000589823 SMPD2O60906 423 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 LCATP04180 440 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 LCKP06239 509 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 CDK1P06493 297 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 ANXA2P07355 339 aaKnown RBP11.76□□□□□ -0.53
VMP1-210ENST00000589823 ZNF19P17023 458 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 DCTDP32321 178 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 CDONQ4KMG0 1287 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 TP53I3Q53FA7 332 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 HIST2H2BCQ6DN03 193 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 VHLLQ6RSH7 139 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 TMPRSS11AQ6ZMR5 421 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 ZNF295-AS1Q8N0V1 137 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 KLHL36Q8N4N3 616 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 NUP37Q8NFH4 326 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 OR5L1Q8NGL2 311 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 OR1J1Q8NGS3 322 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 ABHD4Q8TB40 342 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 AKAP1Q92667 903 aaKnown RBP eCLIP11.76□□□□□ -0.53
VMP1-210ENST00000589823 APOBEC3DQ96AK3 386 aaPredicted RBP11.76□□□□□ -0.53
VMP1-210ENST00000589823 C1QTNF5Q9BXJ0 243 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 CLEC4MQ9H2X3 399 aaPredicted RBP11.76□□□□□ -0.53
VMP1-210ENST00000589823 MRM2Q9UI43 246 aaKnown RBP11.76□□□□□ -0.53
VMP1-210ENST00000589823 LRCH1Q9Y2L9 728 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 N6AMT1Q9Y5N5 214 aa11.76□□□□□ -0.53
VMP1-210ENST00000589823 TMEM269A0A1B0GVZ9 245 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 RGS10O43665 173 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 ICMTO60725 284 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 RPP14O95059 124 aaKnown RBP11.75□□□□□ -0.53
VMP1-210ENST00000589823 TUBG1P23258 451 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 GLRXP35754 106 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 ETV1P50549 477 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 ZNF121P58317 390 aaPredicted RBP11.75□□□□□ -0.53
VMP1-210ENST00000589823 PSMA6P60900 246 aaKnown RBP11.75□□□□□ -0.53
VMP1-210ENST00000589823 PPP1CBP62140 327 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 SLC35A2P78381 396 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 NKX6-1P78426 367 aaPredicted RBP11.75□□□□□ -0.53
VMP1-210ENST00000589823 MALLQ13021 153 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 ZNF684Q5T5D7 378 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 LIPNQ5VXI9 398 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 ZNF787Q6DD87 383 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 RFPL4BQ6ZWI9 263 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 NAA40Q86UY6 237 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 EGFL6Q8IUX8 553 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 ZNF101Q8IZC7 436 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 SYS1Q8N2H4 156 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 PGAM5Q96HS1 289 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 C4orf36Q96KX1 117 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 CCDC90BQ9GZT6 254 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 DUSP21Q9H596 190 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 BRD7Q9NPI1 651 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 TUBG2Q9NRH3 451 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 CA10Q9NS85 328 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 PAK1IP1Q9NWT1 392 aaPredicted RBP11.75□□□□□ -0.53
VMP1-210ENST00000589823 CISD1Q9NZ45 108 aaKnown RBP11.75□□□□□ -0.53
VMP1-210ENST00000589823 GTF2A1LQ9UNN4 478 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 ERGIC3Q9Y282 383 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 STARD10Q9Y365 291 aa11.75□□□□□ -0.53
VMP1-210ENST00000589823 CAB39Q9Y376 341 aaPredicted RBP11.75□□□□□ -0.53
VMP1-210ENST00000589823 UTP20O75691 2785 aaKnown RBP11.75□□□□□ -0.53
VMP1-210ENST00000589823 ACOD1A6NK06 481 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 E7EQL1 145 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 HS3ST1O14792 307 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 MYL12BO14950 172 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms