RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 DECR2Q9NUI1 292 aa8.63□□□□□ -1.03
TPM4-207ENST00000588032 TVP23BQ9NYZ1 205 aa8.63□□□□□ -1.03
TPM4-207ENST00000588032 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.63□□□□□ -1.03
TPM4-207ENST00000588032 PURGQ9UJV8 347 aaKnown RBP8.63□□□□□ -1.03
TPM4-207ENST00000588032 ARFGEF3Q5TH69 2177 aa8.63□□□□□ -1.03
TPM4-207ENST00000588032 A0A096LNT2 108 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 ZNF878C9JN71 531 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 TIMM8AO60220 97 aaPredicted RBP8.62□□□□□ -1.03
TPM4-207ENST00000588032 APOC1P02654 83 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 HPXP02790 462 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 SELEP16581 610 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 IGFBP5P24593 272 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 OTX1P32242 354 aaPredicted RBP8.62□□□□□ -1.03
TPM4-207ENST00000588032 RIPPLY3P57055 190 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 GRB2P62993 217 aaKnown RBP8.62□□□□□ -1.03
TPM4-207ENST00000588032 CCL8P80075 99 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 MALLQ13021 153 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 RIN1Q13671 783 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 TAF13Q15543 124 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 ALKBH6Q3KRA9 238 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 KLHL12Q53G59 568 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 DRAM2Q6UX65 266 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 CXXC5Q7LFL8 322 aaKnown RBP8.62□□□□□ -1.03
TPM4-207ENST00000588032 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 SLAMF6Q96DU3 332 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 KCNJ15Q99712 375 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 RBM4BQ9BQ04 359 aaKnown RBP8.62□□□□□ -1.03
TPM4-207ENST00000588032 COPS4Q9BT78 406 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 TOR3AQ9H497 397 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 SP140LQ9H930 580 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 MED20Q9H944 212 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 CENPMQ9NSP4 180 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 H2AFY2Q9P0M6 372 aaPredicted RBP8.62□□□□□ -1.03
TPM4-207ENST00000588032 OAZ3Q9UMX2 235 aa8.62□□□□□ -1.03
TPM4-207ENST00000588032 ZAR1LA6NP61 321 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 H3BNX3 289 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 M0R135 149 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 TPD52L2O43399 206 aaKnown RBP8.61□□□□□ -1.03
TPM4-207ENST00000588032 SPRY3O43610 288 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 TLX2O43763 284 aaPredicted RBP8.61□□□□□ -1.03
TPM4-207ENST00000588032 IGHV1-46P01743 117 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 LCATP04180 440 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 CD55P08174 381 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 TACSTD2P09758 323 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 SLC2A5P22732 501 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 TNFSF4P23510 183 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 COL8A2P25067 703 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 RPS27P42677 84 aaKnown RBP8.61□□□□□ -1.03
TPM4-207ENST00000588032 CRYBB2P43320 205 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 MAGEB1P43366 347 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 SLC6A9P48067 706 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 EFNB1P98172 346 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 PPP2R2BQ00005 443 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 CDK5R2Q13319 367 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 EIF2B1Q14232 305 aaKnown RBP8.61□□□□□ -1.03
TPM4-207ENST00000588032 LCN1P1Q5VSP4 162 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 SLX4IPQ5VYV7 408 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 C12orf73Q69YU5 71 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 LYPD4Q6UWN0 246 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 DPY19L4Q7Z388 723 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 ERI1Q8IV48 349 aaKnown RBP8.61□□□□□ -1.03
TPM4-207ENST00000588032 TIGD4Q8IY51 512 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 OR8G5Q8NG78 346 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 OR10S1Q8NGN2 331 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 OR6N2Q8NGY6 317 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 OTOSQ8NHW6 89 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 ST7LQ8TDW4 575 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 HPS1Q92902 700 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 ELMOD3Q96FG2 381 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 ZNF799Q96GE5 643 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 ZNF582Q96NG8 517 aaPredicted RBP8.61□□□□□ -1.03
TPM4-207ENST00000588032 TEAD3Q99594 435 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 CIB1Q99828 191 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 PKP2Q99959 881 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 ABHD6Q9BV23 337 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 BPESC1Q9GZL8 116 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 SAP30LQ9HAJ7 183 aa8.61□□□□□ -1.03
TPM4-207ENST00000588032 TMEFF2Q9UIK5 374 aaPredicted RBP8.61□□□□□ -1.03
TPM4-207ENST00000588032 ITPR3Q14573 2671 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 IGHV1-69-2A0A0G2JMI3 117 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 IQCF6A8MYZ5 107 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 CD5LO43866 347 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 MITFO75030 526 aaPredicted RBP8.6□□□□□ -1.03
TPM4-207ENST00000588032 TNFRSF1AP19438 455 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 HSD11B1P28845 292 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 GPR6P46095 362 aaPredicted RBP8.6□□□□□ -1.03
TPM4-207ENST00000588032 GZMKP49863 264 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 CHN2P52757 468 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 RAD23AP54725 363 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 RPS7P62081 194 aaKnown RBP8.6□□□□□ -1.03
TPM4-207ENST00000588032 SLC3A1Q07837 685 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 APOFQ13790 326 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 GGTLC2Q14390 218 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 TSTQ16762 297 aaKnown RBP8.6□□□□□ -1.03
TPM4-207ENST00000588032 TMEM249Q2WGJ8 235 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 HFEQ30201 348 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 TMEM255AQ5JRV8 349 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 CYB5R2Q6BCY4 276 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 SLC16A9Q7RTY1 509 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 NAA40Q86UY6 237 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms