RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 OSMP13725 252 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 RAC2P15153 192 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 HNF1AP20823 631 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 PRKACGP22612 351 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 COL8A2P25067 703 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 GGT2P36268 569 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 SLC25A1P53007 311 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 TPTEP56180 551 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 RPS7P62081 194 aaKnown RBP9.28□□□□□ -0.92
NDEL1-208ENST00000580237 HIST1H3AP68431 136 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 MALLQ13021 153 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 PSG7Q13046 419 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 HLXQ14774 488 aaPredicted RBP9.28□□□□□ -0.92
NDEL1-208ENST00000580237 AVPI1Q5T686 147 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 HIST2H3PS2Q5TEC6 136 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 SHQ1Q6PI26 577 aaKnown RBP9.28□□□□□ -0.92
NDEL1-208ENST00000580237 CCDC121Q6ZUS5 278 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 HIST2H3AQ71DI3 136 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 MRPL21Q7Z2W9 205 aaKnown RBP9.28□□□□□ -0.92
NDEL1-208ENST00000580237 DCXRQ7Z4W1 244 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 ERI1Q8IV48 349 aaKnown RBP9.28□□□□□ -0.92
NDEL1-208ENST00000580237 OR5AS1Q8N127 324 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 ZNF511Q8NB15 262 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 BHLHE23Q8NDY6 225 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 OR2Z1Q8NG97 314 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 OR6N2Q8NGY6 317 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 DNAJC9Q8WXX5 260 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 HPS1Q92902 700 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 ZNF799Q96GE5 643 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 INTS14Q96SY0 518 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 PRRG3Q9BZD7 231 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 OR51V1Q9H2C8 321 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 MED20Q9H944 212 aa9.28□□□□□ -0.92
NDEL1-208ENST00000580237 PAPOLBQ9NRJ5 636 aaKnown RBP9.28□□□□□ -0.92
NDEL1-208ENST00000580237 ZNF878C9JN71 531 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 PRR23D1E9PI22 279 aaPredicted RBP9.27□□□□□ -0.93
NDEL1-208ENST00000580237 SURF4O15260 269 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 LMX1BO60663 402 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 LILRA1O75019 489 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 RP2O75695 350 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 HMGN1P05114 100 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 ACSM4P0C7M7 580 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 PRR23D2P0DMB1 279 aaPredicted RBP9.27□□□□□ -0.93
NDEL1-208ENST00000580237 FCGR1AP12314 374 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 TNFRSF1AP19438 455 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 KITLGP21583 273 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 FASP25445 335 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 HSD11B1P28845 292 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 CRYBB2P43320 205 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 CDH15P55291 814 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 TMEM33P57088 247 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 MVKQ03426 396 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 SLC3A1Q07837 685 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 EIF2B1Q14232 305 aaKnown RBP9.27□□□□□ -0.93
NDEL1-208ENST00000580237 GINS1Q14691 196 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 KLHL12Q53G59 568 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 TMEM255AQ5JRV8 349 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 PLBD1Q6P4A8 553 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 SPATC1Q76KD6 591 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 PEG10Q86TG7 708 aaKnown RBP9.27□□□□□ -0.93
NDEL1-208ENST00000580237 PAPD5Q8NDF8 572 aaKnown RBP9.27□□□□□ -0.93
NDEL1-208ENST00000580237 CLDND2Q8NHS1 167 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 CCL17Q92583 94 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 RAB1CQ92928 201 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 PTP4A1Q93096 173 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 SLCO4A1Q96BD0 722 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 MSI2Q96DH6 328 aaKnown RBP9.27□□□□□ -0.93
NDEL1-208ENST00000580237 MAP6Q96JE9 813 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 ZNF582Q96NG8 517 aaPredicted RBP9.27□□□□□ -0.93
NDEL1-208ENST00000580237 SHARPINQ9H0F6 387 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 WDR76Q9H967 626 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 CENPMQ9NSP4 180 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 TREM2Q9NZC2 230 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 LPAR3Q9UBY5 353 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 CDC42EP3Q9UKI2 254 aa9.27□□□□□ -0.93
NDEL1-208ENST00000580237 NF1P21359 2839 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 ZNF593O00488 134 aaPredicted RBP9.26□□□□□ -0.93
NDEL1-208ENST00000580237 SELEP16581 610 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 GSTT1P30711 240 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 IL2RGP31785 369 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 SLC15A1P46059 708 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 ATP6AP1Q15904 470 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 ZNF362Q5T0B9 420 aaPredicted RBP9.26□□□□□ -0.93
NDEL1-208ENST00000580237 OR2T2Q6IF00 324 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 FBXW12Q6X9E4 464 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 ZNF771Q7L3S4 317 aaPredicted RBP9.26□□□□□ -0.93
NDEL1-208ENST00000580237 HIPK1Q86Z02 1210 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 ZNF283Q8N7M2 679 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 LINC01356Q8N9X3 169 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 OR10AD1Q8NGE0 317 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 OR5K1Q8NHB7 308 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 ZNRF4Q8WWF5 429 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 HAVCR1Q96D42 359 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 RAB39BQ96DA2 213 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 SLAMF6Q96DU3 332 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 NRBF2Q96F24 287 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 DDOQ99489 341 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 GAL3ST1Q99999 423 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 BEX2Q9BXY8 128 aa9.26□□□□□ -0.93
NDEL1-208ENST00000580237 NMNAT2Q9BZQ4 307 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms