RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 DUSP21Q9H596 190 aa11.99□□□□□ -0.49
LINC01543-201ENST00000578367 MOB1AQ9H8S9 216 aa11.99□□□□□ -0.49
LINC01543-201ENST00000578367 FAIMQ9NVQ4 179 aa11.99□□□□□ -0.49
LINC01543-201ENST00000578367 EDARQ9UNE0 448 aa11.99□□□□□ -0.49
LINC01543-201ENST00000578367 COPS3Q9UNS2 423 aa11.99□□□□□ -0.49
LINC01543-201ENST00000578367 CAB39Q9Y376 341 aaPredicted RBP11.99□□□□□ -0.49
LINC01543-201ENST00000578367 PCDHGB5Q9Y5G0 923 aa11.99□□□□□ -0.49
LINC01543-201ENST00000578367 ICE1Q9Y2F5 2266 aa11.99□□□□□ -0.49
LINC01543-201ENST00000578367 CRHBPP24387 322 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 GABARAPL2P60520 117 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 SLC35A2P78381 396 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 HGFACQ04756 655 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 MOGQ16653 247 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 TMPRSS11AQ6ZMR5 421 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 MYPOPQ86VE0 399 aaPredicted RBP11.98□□□□□ -0.49
LINC01543-201ENST00000578367 STX19Q8N4C7 294 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 MARVELD3Q96A59 401 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 AMELYQ99218 206 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 DOK1Q99704 481 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 CLEC4MQ9H2X3 399 aaPredicted RBP11.98□□□□□ -0.49
LINC01543-201ENST00000578367 RGCCQ9H4X1 137 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 ERVK13-1Q9NX77 482 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 SLCO1C1Q9NYB5 712 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 MYRFQ9Y2G1 1151 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 LRCH1Q9Y2L9 728 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 KLHDC2Q9Y2U9 406 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 GRIP1Q9Y3R0 1128 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 LRP12Q9Y561 859 aa11.98□□□□□ -0.49
LINC01543-201ENST00000578367 DOPEY2Q9Y3R5 2298 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 ATP6V1G2-DDX39BF2Z307 99 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 F5H5K5 113 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 HS3ST1O14792 307 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 XPNPEP2O43895 674 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 SMPD2O60906 423 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 CCNOP22674 350 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 CFL1P23528 166 aaKnown RBP11.97□□□□□ -0.49
LINC01543-201ENST00000578367 APOBEC3AP31941 199 aaPredicted RBP11.97□□□□□ -0.49
LINC01543-201ENST00000578367 WNT5AP41221 380 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 HCCSP53701 268 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 SELENOVP59797 346 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 PSMA6P60900 246 aaKnown RBP11.97□□□□□ -0.49
LINC01543-201ENST00000578367 ZNF85Q03923 595 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 MALLQ13021 153 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 C20orf204Q6ZNR8 217 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 ZNF786Q8N393 782 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 ZNF283Q8N7M2 679 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 ZNF611Q8N823 705 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 OR52N1Q8NH53 320 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 FBXW5Q969U6 566 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 DHRS9Q9BPW9 319 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 ZNF649Q9BS31 505 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 CDCA4Q9BXL8 241 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 CA10Q9NS85 328 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 CISD1Q9NZ45 108 aaKnown RBP11.97□□□□□ -0.49
LINC01543-201ENST00000578367 MRM2Q9UI43 246 aaKnown RBP11.97□□□□□ -0.49
LINC01543-201ENST00000578367 POU2F3Q9UKI9 436 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 IKZF2Q9UKS7 526 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 CMAHPQ9Y471 501 aa11.97□□□□□ -0.49
LINC01543-201ENST00000578367 TMEM129A0AVI4 362 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 XRCC2O43543 280 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 APOL3O95236 402 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 CDK1P06493 297 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 DBHP09172 617 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 LIMS3P0CW19 117 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 LIMS4P0CW20 117 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 ZNF250P15622 560 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 COL8A1P27658 744 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 CX3CR1P49238 355 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 SNTB2Q13425 540 aaKnown RBP11.96□□□□□ -0.49
LINC01543-201ENST00000578367 ZNF718Q3SXZ3 478 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 MBNL2Q5VZF2 373 aaKnown RBP11.96□□□□□ -0.49
LINC01543-201ENST00000578367 RGS7BPQ6MZT1 257 aaPredicted RBP11.96□□□□□ -0.49
LINC01543-201ENST00000578367 FDX2Q6P4F2 183 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 LRRN1Q6UXK5 716 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 FBXW12Q6X9E4 464 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 AHSA2Q719I0 299 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 PRSS48Q7RTY5 328 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 KLHL36Q8N4N3 616 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 PAQR4Q8N4S7 273 aaPredicted RBP11.96□□□□□ -0.49
LINC01543-201ENST00000578367 CCDC54Q8NEL0 328 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 SMAP2Q8WU79 429 aaPredicted RBP11.96□□□□□ -0.49
LINC01543-201ENST00000578367 AKAP1Q92667 903 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC01543-201ENST00000578367 ALG8Q9BVK2 526 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 UBAP1Q9NZ09 502 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 NUFIP1Q9UHK0 495 aaKnown RBP11.96□□□□□ -0.49
LINC01543-201ENST00000578367 ERGIC3Q9Y282 383 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 ATP23Q9Y6H3 246 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 R4GMQ9 66 aa11.96□□□□□ -0.49
LINC01543-201ENST00000578367 PTPN13Q12923 2485 aa11.96□□□□□ -0.5
LINC01543-201ENST00000578367 A0A0U1RQV5 110 aa11.95□□□□□ -0.5
LINC01543-201ENST00000578367 TMEM269A0A1B0GVZ9 245 aa11.95□□□□□ -0.5
LINC01543-201ENST00000578367 RGS10O43665 173 aa11.95□□□□□ -0.5
LINC01543-201ENST00000578367 MT-ND5P03915 603 aa11.95□□□□□ -0.5
LINC01543-201ENST00000578367 LCATP04180 440 aa11.95□□□□□ -0.5
LINC01543-201ENST00000578367 CCL2P13500 99 aa11.95□□□□□ -0.5
LINC01543-201ENST00000578367 RAC2P15153 192 aa11.95□□□□□ -0.5
LINC01543-201ENST00000578367 SELEP16581 610 aa11.95□□□□□ -0.5
LINC01543-201ENST00000578367 SLC6A9P48067 706 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms