RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 C1orf198Q9H425 327 aa2.55□□□□□ -2
CDC27-219ENST00000576484 NMRK1Q9NWW6 199 aa2.55□□□□□ -2
CDC27-219ENST00000576484 SLC17A4Q9Y2C5 497 aa2.55□□□□□ -2
CDC27-219ENST00000576484 H7C1H1 209 aa2.54□□□□□ -2
CDC27-219ENST00000576484 SLC22A5O76082 557 aa2.54□□□□□ -2
CDC27-219ENST00000576484 LOXP28300 417 aaPredicted RBP2.54□□□□□ -2
CDC27-219ENST00000576484 OR1E1P30953 314 aa2.54□□□□□ -2
CDC27-219ENST00000576484 PRRX1P54821 245 aa2.54□□□□□ -2
CDC27-219ENST00000576484 TAS2R31P59538 309 aa2.54□□□□□ -2
CDC27-219ENST00000576484 RPS23P62266 143 aaKnown RBP2.54□□□□□ -2
CDC27-219ENST00000576484 KIR2DS1Q14954 304 aa2.54□□□□□ -2
CDC27-219ENST00000576484 TRAM2Q15035 370 aa2.54□□□□□ -2
CDC27-219ENST00000576484 PGGHGQ32M88 737 aa2.54□□□□□ -2
CDC27-219ENST00000576484 HSP90AB3PQ58FF7 597 aa2.54□□□□□ -2
CDC27-219ENST00000576484 RNASE13Q5GAN3 156 aaKnown RBP2.54□□□□□ -2
CDC27-219ENST00000576484 MBOAT2Q6ZWT7 520 aa2.54□□□□□ -2
CDC27-219ENST00000576484 OR11H7Q8NGC8 314 aa2.54□□□□□ -2
CDC27-219ENST00000576484 OR5K2Q8NHB8 316 aa2.54□□□□□ -2
CDC27-219ENST00000576484 LYPD6BQ8NI32 183 aa2.54□□□□□ -2
CDC27-219ENST00000576484 PHF10Q8WUB8 498 aaKnown RBP2.54□□□□□ -2
CDC27-219ENST00000576484 RTN4IP1Q8WWV3 396 aaPredicted RBP2.54□□□□□ -2
CDC27-219ENST00000576484 SLC25A46Q96AG3 418 aa2.54□□□□□ -2
CDC27-219ENST00000576484 SAMD10Q9BYL1 202 aa2.54□□□□□ -2
CDC27-219ENST00000576484 ZNF160Q9HCG1 818 aa2.54□□□□□ -2
CDC27-219ENST00000576484 C8orf17Q9NRJ1 99 aa2.54□□□□□ -2
CDC27-219ENST00000576484 BRWD3Q6RI45 1802 aa2.54□□□□□ -2
CDC27-219ENST00000576484 TRAV19A0A0A6YYK7 116 aa2.53□□□□□ -2
CDC27-219ENST00000576484 AP3B1O00203 1094 aa2.53□□□□□ -2
CDC27-219ENST00000576484 CHST10O43529 356 aa2.53□□□□□ -2
CDC27-219ENST00000576484 SEMA3DO95025 777 aa2.53□□□□□ -2
CDC27-219ENST00000576484 HLA-DQB1P01920 261 aa2.53□□□□□ -2
CDC27-219ENST00000576484 ZNF688P0C7X2 276 aa2.53□□□□□ -2
CDC27-219ENST00000576484 RNASE2P10153 161 aaKnown RBP2.53□□□□□ -2
CDC27-219ENST00000576484 CD37P11049 281 aa2.53□□□□□ -2
CDC27-219ENST00000576484 BCKDHBP21953 392 aa2.53□□□□□ -2
CDC27-219ENST00000576484 OTX1P32242 354 aaPredicted RBP2.53□□□□□ -2
CDC27-219ENST00000576484 GFERP55789 205 aa2.53□□□□□ -2
CDC27-219ENST00000576484 RPL23P62829 140 aaKnown RBP2.53□□□□□ -2
CDC27-219ENST00000576484 LIPEQ05469 1076 aa2.53□□□□□ -2
CDC27-219ENST00000576484 CARD17Q5XLA6 110 aa2.53□□□□□ -2
CDC27-219ENST00000576484 ADNP2Q6IQ32 1131 aa2.53□□□□□ -2
CDC27-219ENST00000576484 C12orf54Q6X4T0 127 aa2.53□□□□□ -2
CDC27-219ENST00000576484 FAM71AQ8IYT1 594 aa2.53□□□□□ -2
CDC27-219ENST00000576484 CNPY4Q8N129 248 aa2.53□□□□□ -2
CDC27-219ENST00000576484 TMEM256Q8N2U0 113 aa2.53□□□□□ -2
CDC27-219ENST00000576484 OR13G1Q8NGZ3 307 aa2.53□□□□□ -2
CDC27-219ENST00000576484 OR51E1Q8TCB6 317 aa2.53□□□□□ -2
CDC27-219ENST00000576484 ZNF317Q96PQ6 595 aaPredicted RBP2.53□□□□□ -2
CDC27-219ENST00000576484 PANX1Q96RD7 426 aa2.53□□□□□ -2
CDC27-219ENST00000576484 TGS1Q96RS0 853 aaKnown RBP2.53□□□□□ -2
CDC27-219ENST00000576484 RBBP8Q99708 897 aa2.53□□□□□ -2
CDC27-219ENST00000576484 TBL1YQ9BQ87 522 aa2.53□□□□□ -2
CDC27-219ENST00000576484 ZNF717Q9BY31 904 aaPredicted RBP2.53□□□□□ -2
CDC27-219ENST00000576484 NINLQ9Y2I6 1382 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 A0A0J9YXV3 536 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 GABRR3A8MPY1 467 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 KRBOX1C9JBD0 128 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 LGALS9O00182 355 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 PLPP1O14494 284 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 ERLIN1O75477 346 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 OR2F2O95006 317 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 IGLV3-25P01717 112 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 KRT14P02533 472 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 CSNK2A2P19784 350 aaPredicted RBP2.52□□□□□ -2.01
CDC27-219ENST00000576484 ME2P23368 584 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 SEMG2Q02383 582 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 ZNF266Q14584 549 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 RBMY1FQ15415 496 aaKnown RBP2.52□□□□□ -2.01
CDC27-219ENST00000576484 C1orf185Q5T7R7 199 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 GPR26Q8NDV2 337 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 OR9A2Q8NGT5 310 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 RNF145Q96MT1 663 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 GGTLC1Q9BX51 225 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 TMEM38AQ9H6F2 299 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 BEX1Q9HBH7 125 aa2.52□□□□□ -2.01
CDC27-219ENST00000576484 AHDC1Q5TGY3 1603 aaPredicted RBP2.51□□□□□ -2.01
CDC27-219ENST00000576484 CENPVL3A0A0U1RRI6 287 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 ZNF233A6NK53 670 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 HUS1O60921 280 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 MYL2P10916 166 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 EIF2S2P20042 333 aaKnown RBP2.51□□□□□ -2.01
CDC27-219ENST00000576484 GTF2E2P29084 291 aaKnown RBP2.51□□□□□ -2.01
CDC27-219ENST00000576484 RBM34P42696 430 aaKnown RBP2.51□□□□□ -2.01
CDC27-219ENST00000576484 CCNG1P51959 295 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 LRRC74AQ0VAA2 488 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 DGCR6Q14129 220 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 TPTE2P1Q5T6R2 138 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 CBR4Q8N4T8 237 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 MIR7-3HGQ8N6C7 128 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 LRRC52Q8N7C0 313 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 TTLQ8NG68 377 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 OR4C5Q8NGB2 326 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 NRGNQ92686 78 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 ACTR3CQ9C0K3 210 aaPredicted RBP2.51□□□□□ -2.01
CDC27-219ENST00000576484 TMEM185BQ9H7F4 350 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 NEK6Q9HC98 313 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 AGPAT4Q9NRZ5 378 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 PTTG3PQ9NZH4 202 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 SLC17A7Q9P2U7 560 aa2.51□□□□□ -2.01
CDC27-219ENST00000576484 ENOPH1Q9UHY7 261 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms