RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PPP2R2BQ00005 443 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 TSTQ16762 297 aaKnown RBP20.02■□□□□ 0.8
SNF8-217ENST00000576353 PLBD1Q6P4A8 553 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 COLCA1Q6ZS62 124 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 AMIGO2Q86SJ2 522 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 LRTOMTQ8WZ04 291 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 GTF3AQ92664 365 aaKnown RBP20.02■□□□□ 0.8
SNF8-217ENST00000576353 C1QTNF5Q9BXJ0 243 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 OR51V1Q9H2C8 321 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 KRT84Q9NSB2 600 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 DDX28Q9NUL7 540 aaKnown RBP20.02■□□□□ 0.8
SNF8-217ENST00000576353 ZANQ9Y493 2812 aa20.02■□□□□ 0.79
SNF8-217ENST00000576353 C2CD3Q4AC94 2353 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 TLN2Q9Y4G6 2542 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 HIVEP2P31629 2446 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 IGHV4-61A0A0C4DH41 118 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 ZSCAN5BA6NJL1 495 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 IGHV1-46P01743 117 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 CRYBB2P43320 205 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 ACTR3P61158 418 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 TMEM236Q5W0B7 351 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 CYB5R2Q6BCY4 276 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 FBXW12Q6X9E4 464 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 C10orf67Q8IYJ2 551 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 OR10S1Q8NGN2 331 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 CENPNQ96H22 339 aaPredicted RBP20.01■□□□□ 0.79
SNF8-217ENST00000576353 INTS14Q96SY0 518 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 EGLN1Q9GZT9 426 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 GABARAPL1Q9H0R8 117 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 SAP30LQ9HAJ7 183 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 PTTG3PQ9NZH4 202 aa20.01■□□□□ 0.79
SNF8-217ENST00000576353 IGHV1-69-2A0A0G2JMI3 117 aa20■□□□□ 0.79
SNF8-217ENST00000576353 PRODHO43272 600 aa20■□□□□ 0.79
SNF8-217ENST00000576353 LCATP04180 440 aa20■□□□□ 0.79
SNF8-217ENST00000576353 TACSTD2P09758 323 aa20■□□□□ 0.79
SNF8-217ENST00000576353 GZMKP49863 264 aa20■□□□□ 0.79
SNF8-217ENST00000576353 CHN2P52757 468 aa20■□□□□ 0.79
SNF8-217ENST00000576353 TAF13Q15543 124 aa20■□□□□ 0.79
SNF8-217ENST00000576353 SNAPC1Q16533 368 aa20■□□□□ 0.79
SNF8-217ENST00000576353 CPOQ8IVL8 374 aa20■□□□□ 0.79
SNF8-217ENST00000576353 YIPF5Q969M3 257 aa20■□□□□ 0.79
SNF8-217ENST00000576353 PRRG3Q9BZD7 231 aa20■□□□□ 0.79
SNF8-217ENST00000576353 MARCH7Q9H992 704 aa20■□□□□ 0.79
SNF8-217ENST00000576353 MSL2Q9HCI7 577 aa20■□□□□ 0.79
SNF8-217ENST00000576353 ZNF275Q9NSD4 429 aaPredicted RBP20■□□□□ 0.79
SNF8-217ENST00000576353 TVP23BQ9NYZ1 205 aa20■□□□□ 0.79
SNF8-217ENST00000576353 ENOPH1Q9UHY7 261 aa20■□□□□ 0.79
SNF8-217ENST00000576353 M0R135 149 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 CDC14BO60729 498 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 GPR6P46095 362 aaPredicted RBP19.99■□□□□ 0.79
SNF8-217ENST00000576353 MALLQ13021 153 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 CDK5R2Q13319 367 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 HLXQ14774 488 aaPredicted RBP19.99■□□□□ 0.79
SNF8-217ENST00000576353 KPNB1Q14974 876 aaKnown RBP19.99■□□□□ 0.79
SNF8-217ENST00000576353 PTGES3Q15185 160 aaKnown RBP19.99■□□□□ 0.79
SNF8-217ENST00000576353 KLHL12Q53G59 568 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 KDM4DQ6B0I6 523 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 USP51Q70EK9 711 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 SHFQ7M4L6 423 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 ERI1Q8IV48 349 aaKnown RBP19.99■□□□□ 0.79
SNF8-217ENST00000576353 OR6N2Q8NGY6 317 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 SLAMF6Q96DU3 332 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 ZNF799Q96GE5 643 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 COPS4Q9BT78 406 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 YAE1D1Q9NRH1 226 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 CENPMQ9NSP4 180 aa19.99■□□□□ 0.79
SNF8-217ENST00000576353 NF1P21359 2839 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 INAFM1C9JVW0 142 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 RP2O75695 350 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 CD55P08174 381 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 IGHV4-31P0DP07 118 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 PSKH1P11801 424 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 SELEP16581 610 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 TNFSF4P23510 183 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 SLC15A1P46059 708 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 SLC6A9P48067 706 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 EIF2B1Q14232 305 aaKnown RBP19.98■□□□□ 0.79
SNF8-217ENST00000576353 SLC35D3Q5M8T2 416 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 ZFP1Q6P2D0 407 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 DRAM2Q6UX65 266 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 DPY19L4Q7Z388 723 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 ST7LQ8TDW4 575 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 PYDC1Q8WXC3 89 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 HPS1Q92902 700 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 ELMOD3Q96FG2 381 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 SEMA6AQ9H2E6 1030 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 CR1P17927 2039 aa19.98■□□□□ 0.79
SNF8-217ENST00000576353 ZNF878C9JN71 531 aa19.97■□□□□ 0.79
SNF8-217ENST00000576353 PPIHO43447 177 aaKnown RBP19.97■□□□□ 0.79
SNF8-217ENST00000576353 LILRA1O75019 489 aa19.97■□□□□ 0.79
SNF8-217ENST00000576353 MITFO75030 526 aaPredicted RBP19.97■□□□□ 0.79
SNF8-217ENST00000576353 HOXB4P17483 251 aaPredicted RBP19.97■□□□□ 0.79
SNF8-217ENST00000576353 OTX1P32242 354 aaPredicted RBP19.97■□□□□ 0.79
SNF8-217ENST00000576353 TNFAIP6P98066 277 aaPredicted RBP19.97■□□□□ 0.79
SNF8-217ENST00000576353 HFEQ30201 348 aa19.97■□□□□ 0.79
SNF8-217ENST00000576353 CXXC5Q7LFL8 322 aaKnown RBP19.97■□□□□ 0.79
SNF8-217ENST00000576353 NAA40Q86UY6 237 aa19.97■□□□□ 0.79
SNF8-217ENST00000576353 TIGD4Q8IY51 512 aa19.97■□□□□ 0.79
SNF8-217ENST00000576353 ZMYND19Q96E35 227 aaPredicted RBP19.97■□□□□ 0.79
SNF8-217ENST00000576353 ZNF582Q96NG8 517 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms