RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 KITLGP21583 273 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 GIFP27352 417 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 HSD11B1P28845 292 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 CDC42P60953 191 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 GABPB1Q06547 395 aaPredicted RBP11.93□□□□□ -0.5
RPAIN-211ENST00000572174 LOXL1Q08397 574 aaPredicted RBP11.93□□□□□ -0.5
RPAIN-211ENST00000572174 EIF2B1Q14232 305 aaKnown RBP11.93□□□□□ -0.5
RPAIN-211ENST00000572174 MSMPQ1L6U9 139 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 KRTAP27-1Q3LI81 207 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 LINC01590Q5TEZ4 76 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 SLX4IPQ5VYV7 408 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 CLEC9AQ6UXN8 241 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 LRP11Q86VZ4 500 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 GID4Q8IVV7 300 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 SLAMF6Q96DU3 332 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 MAP6Q96JE9 813 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 KCNJ15Q99712 375 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 CIB1Q99828 191 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 C1QTNF5Q9BXJ0 243 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 TPK1Q9H3S4 243 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 NIPAL2Q9H841 368 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 WDR76Q9H967 626 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 CHODLQ9H9P2 273 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 SAP30LQ9HAJ7 183 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 PNRC2Q9NPJ4 139 aaKnown RBP11.93□□□□□ -0.5
RPAIN-211ENST00000572174 MYEF2Q9P2K5 600 aaKnown RBP11.93□□□□□ -0.5
RPAIN-211ENST00000572174 PURGQ9UJV8 347 aaKnown RBP11.93□□□□□ -0.5
RPAIN-211ENST00000572174 TMEM14AQ9Y6G1 99 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.93□□□□□ -0.51e-8■■■■□ 23
RPAIN-211ENST00000572174 DYSFO75923 2080 aa11.93□□□□□ -0.5
RPAIN-211ENST00000572174 IGHV4-30-2A0A087WSY4 118 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 SAC3D1A6NKF1 404 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 H3BNX3 289 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 SMAD7O15105 426 aaKnown RBP11.92□□□□□ -0.5
RPAIN-211ENST00000572174 LCATP04180 440 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 HEXAP06865 529 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 CLUP10909 449 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 TNFRSF1AP19438 455 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 USF1P22415 310 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-211ENST00000572174 CFL1P23528 166 aaKnown RBP11.92□□□□□ -0.5
RPAIN-211ENST00000572174 OTX1P32242 354 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-211ENST00000572174 MMP15P51511 669 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 ALDH3A2P51648 485 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 SLC3A1Q07837 685 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 MAD2L1BPQ15013 274 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-211ENST00000572174 NXNL2Q5VZ03 156 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 OTPQ5XKR4 325 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 C12orf73Q69YU5 71 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 KCTD18Q6PI47 426 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-211ENST00000572174 COLCA1Q6ZS62 124 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 DPY19L4Q7Z388 723 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 TMEM163Q8TC26 289 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 SLC7A6Q92536 515 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 HAVCR1Q96D42 359 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 CMBLQ96DG6 245 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 ELMOD3Q96FG2 381 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 MNTQ99583 582 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 MED20Q9H944 212 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 S100A14Q9HCY8 104 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 USE1Q9NZ43 259 aa11.92□□□□□ -0.5
RPAIN-211ENST00000572174 TLN2Q9Y4G6 2542 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 SNTNA6NMZ2 147 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 PHYHO14832 338 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 XRCC2O43543 280 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 ALPLP05186 524 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 LYNP07948 512 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 DBHP09172 617 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 SLC2A5P22732 501 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 MPV17P39210 176 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 NR4A2P43354 598 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 TMEM33P57088 247 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 POU4F2Q12837 409 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 PSG7Q13046 419 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 APOFQ13790 326 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 SNCBQ16143 134 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 ZSCAN26Q16670 478 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 TMEM236Q5W0B7 351 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 SLC16A9Q7RTY1 509 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 MRPL21Q7Z2W9 205 aaKnown RBP11.91□□□□□ -0.5
RPAIN-211ENST00000572174 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.91□□□□□ -0.5
RPAIN-211ENST00000572174 TIGD4Q8IY51 512 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 PQLC1Q8N2U9 271 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 ZNF283Q8N7M2 679 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 OR8J1Q8NGP2 316 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 OTOSQ8NHW6 89 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 ST7LQ8TDW4 575 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 ASB17Q8WXJ9 295 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 RFKQ969G6 155 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 ZMYND19Q96E35 227 aaPredicted RBP11.91□□□□□ -0.5
RPAIN-211ENST00000572174 TIMD4Q96H15 378 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 ZNF582Q96NG8 517 aaPredicted RBP11.91□□□□□ -0.5
RPAIN-211ENST00000572174 PKP2Q99959 881 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 SLC22A4Q9H015 551 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 RIBC2Q9H4K1 309 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 C8orf4Q9NR00 106 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 CENPMQ9NSP4 180 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 IMPAD1Q9NX62 359 aa11.91□□□□□ -0.5
RPAIN-211ENST00000572174 STARD10Q9Y365 291 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms